RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C YMR244WQ04018 355 aa1.64□□□□□ -2.15
RTT101YJL047C TRM12Q04235 462 aa1.64□□□□□ -2.15
RTT101YJL047C FMP42Q04991 504 aa1.64□□□□□ -2.15
RTT101YJL047C HRD1Q08109 551 aa1.64□□□□□ -2.15
RTT101YJL047C DGA1Q08650 418 aa1.64□□□□□ -2.15
RTT101YJL047C YPL257WQ08974 193 aa1.64□□□□□ -2.15
RTT101YJL047C TOP2P06786 1428 aaKnown RBP1.64□□□□□ -2.15
RTT101YJL047C UGX2P32772 223 aa1.64□□□□□ -2.15
RTT101YJL047C UTP11P34247 250 aaPredicted RBP1.64□□□□□ -2.15
RTT101YJL047C TVP38P36164 337 aa1.64□□□□□ -2.15
RTT101YJL047C BAT1P38891 393 aaKnown RBP1.64□□□□□ -2.15
RTT101YJL047C AST2P39945 430 aaKnown RBP1.64□□□□□ -2.15
RTT101YJL047C YND1P40009 630 aa1.64□□□□□ -2.15
RTT101YJL047C HMF1P40037 129 aaKnown RBP1.64□□□□□ -2.15
RTT101YJL047C YNL208WP40159 199 aaKnown RBP1.64□□□□□ -2.15
RTT101YJL047C HPM1P40481 377 aa1.64□□□□□ -2.15
RTT101YJL047C STB1P42845 420 aa1.64□□□□□ -2.15
RTT101YJL047C COS10P52924 374 aa1.64□□□□□ -2.15
RTT101YJL047C SDT1P53078 280 aa1.64□□□□□ -2.15
RTT101YJL047C YGL101WP53144 215 aa1.64□□□□□ -2.15
RTT101YJL047C YDR476CQ03362 224 aa1.64□□□□□ -2.15
RTT101YJL047C GAS3Q03655 524 aa1.64□□□□□ -2.15
RTT101YJL047C YMD8Q03697 442 aa1.64□□□□□ -2.15
RTT101YJL047C RAV2Q03956 351 aa1.64□□□□□ -2.15
RTT101YJL047C FRQ1Q06389 190 aa1.64□□□□□ -2.15
RTT101YJL047C SUE1Q06524 206 aa1.64□□□□□ -2.15
RTT101YJL047C IPP1P00817 287 aaKnown RBP1.63□□□□□ -2.15
RTT101YJL047C YCR101CP25607 182 aa1.63□□□□□ -2.15
RTT101YJL047C CPR5P35176 225 aa1.63□□□□□ -2.15
RTT101YJL047C UTP30P36144 274 aaKnown RBP1.63□□□□□ -2.15
RTT101YJL047C YBL081WP38180 368 aaKnown RBP1.63□□□□□ -2.15
RTT101YJL047C OPY1P38271 328 aa1.63□□□□□ -2.15
RTT101YJL047C YEA4P40004 342 aa1.63□□□□□ -2.15
RTT101YJL047C BIR1P47134 954 aa1.63□□□□□ -2.15
RTT101YJL047C YNL010WP53981 241 aaKnown RBP1.63□□□□□ -2.15
RTT101YJL047C LSM3P57743 89 aaKnown RBP1.63□□□□□ -2.15
RTT101YJL047C VHS1Q03785 461 aa1.63□□□□□ -2.15
RTT101YJL047C MRX8Q05473 314 aa1.63□□□□□ -2.15
RTT101YJL047C NDD1Q08887 554 aa1.63□□□□□ -2.15
RTT101YJL047C AKR2Q12013 749 aa1.63□□□□□ -2.15
RTT101YJL047C TDA8Q6B2U8 126 aa1.63□□□□□ -2.15
RTT101YJL047C YFR032C-BQ8TGU2 87 aa1.63□□□□□ -2.15
RTT101YJL047C DUR1,2P32528 1835 aaKnown RBP1.63□□□□□ -2.15
RTT101YJL047C PET9P18239 318 aaKnown RBP1.63□□□□□ -2.15
RTT101YJL047C LDB16P25587 256 aa1.63□□□□□ -2.15
RTT101YJL047C MSA2P36157 363 aa1.63□□□□□ -2.15
RTT101YJL047C PHO89P38361 574 aa1.63□□□□□ -2.15
RTT101YJL047C TIM17P39515 158 aa1.63□□□□□ -2.15
RTT101YJL047C IRC22P40006 225 aa1.63□□□□□ -2.15
RTT101YJL047C APQ12P40532 138 aa1.63□□□□□ -2.15
RTT101YJL047C YJL028WP47062 111 aa1.63□□□□□ -2.15
RTT101YJL047C THI74Q04083 370 aa1.63□□□□□ -2.15
RTT101YJL047C YOR289WQ12012 251 aaPredicted RBP1.63□□□□□ -2.15
RTT101YJL047C YPL162CQ12042 273 aa1.63□□□□□ -2.15
RTT101YJL047C DAS2Q12084 232 aa1.63□□□□□ -2.15
RTT101YJL047C YPS3Q12303 508 aa1.63□□□□□ -2.15
RTT101YJL047C IZH2Q12442 317 aa1.63□□□□□ -2.15
RTT101YJL047C RPL21BQ12672 160 aaKnown RBP1.63□□□□□ -2.15
RTT101YJL047C RPB5P20434 215 aa1.62□□□□□ -2.15
RTT101YJL047C SCL1P21243 252 aaKnown RBP1.62□□□□□ -2.15
RTT101YJL047C MAG1P22134 296 aaKnown RBP1.62□□□□□ -2.15
RTT101YJL047C SPO13P23624 291 aa1.62□□□□□ -2.15
RTT101YJL047C ERG2P32352 222 aa1.62□□□□□ -2.15
RTT101YJL047C GGC1P38988 300 aa1.62□□□□□ -2.15
RTT101YJL047C YFL067WP43537 175 aa1.62□□□□□ -2.15
RTT101YJL047C RPA43P46669 326 aa1.62□□□□□ -2.15
RTT101YJL047C GPI14P47088 403 aaKnown RBP1.62□□□□□ -2.15
RTT101YJL047C YGR219WP53307 113 aa1.62□□□□□ -2.15
RTT101YJL047C CAB4P53332 305 aa1.62□□□□□ -2.15
RTT101YJL047C SWT21P53873 357 aaPredicted RBP1.62□□□□□ -2.15
RTT101YJL047C PGA1P53896 198 aa1.62□□□□□ -2.15
RTT101YJL047C ACT1P60010 375 aaKnown RBP1.62□□□□□ -2.15
RTT101YJL047C INP1Q03694 420 aa1.62□□□□□ -2.15
RTT101YJL047C PLP1Q04004 230 aa1.62□□□□□ -2.15
RTT101YJL047C NIP7Q08962 181 aaKnown RBP1.62□□□□□ -2.15
RTT101YJL047C ATG5Q12380 294 aa1.62□□□□□ -2.15
RTT101YJL047C MPD1Q12404 318 aaKnown RBP1.62□□□□□ -2.15
RTT101YJL047C YER078W-AQ3E7A2 54 aa1.62□□□□□ -2.15
RTT101YJL047C YCL021W-AQ96VH3 125 aa1.62□□□□□ -2.15
RTT101YJL047C ADH1P00330 348 aaKnown RBP1.62□□□□□ -2.15
RTT101YJL047C Q0255P03881 472 aa1.62□□□□□ -2.15
RTT101YJL047C KIN28P06242 306 aa1.62□□□□□ -2.15
RTT101YJL047C RSA4P25382 515 aaKnown RBP1.62□□□□□ -2.15
RTT101YJL047C GSP1P32835 219 aaKnown RBP1.62□□□□□ -2.15
RTT101YJL047C GSP2P32836 220 aaKnown RBP1.62□□□□□ -2.15
RTT101YJL047C ZRT3P34240 503 aa1.62□□□□□ -2.15
RTT101YJL047C ERJ5P43613 295 aaPredicted RBP1.62□□□□□ -2.15
RTT101YJL047C MNN5P46982 586 aa1.62□□□□□ -2.15
RTT101YJL047C RUB1Q03919 77 aa1.62□□□□□ -2.15
RTT101YJL047C LPP1Q04396 274 aa1.62□□□□□ -2.15
RTT101YJL047C YDR115WQ04598 105 aa1.62□□□□□ -2.15
RTT101YJL047C YDR278CQ05612 105 aa1.62□□□□□ -2.15
RTT101YJL047C SLO1Q3E784 85 aa1.62□□□□□ -2.15
RTT101YJL047C TSC3Q3E790 80 aa1.62□□□□□ -2.15
RTT101YJL047C RPL30P14120 105 aaKnown RBP1.61□□□□□ -2.15
RTT101YJL047C CKS1P20486 150 aaKnown RBP1.61□□□□□ -2.15
RTT101YJL047C RPS1BP23248 255 aaKnown RBP1.61□□□□□ -2.15
RTT101YJL047C YCR043CP25361 127 aa1.61□□□□□ -2.15
RTT101YJL047C SEC17P32602 292 aa1.61□□□□□ -2.15
RTT101YJL047C AVT6P40074 448 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms