RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C SRY1P36007 326 aa2.92□□□□□ -1.94
VPS53YJL029C YNK1P36010 153 aaKnown RBP2.92□□□□□ -1.94
VPS53YJL029C URM1P40554 99 aaPredicted RBP2.92□□□□□ -1.94
VPS53YJL029C SOL1P50278 321 aa2.92□□□□□ -1.94
VPS53YJL029C YNR071CP53757 342 aa2.92□□□□□ -1.94
VPS53YJL029C RPL21AQ02753 160 aaKnown RBP2.92□□□□□ -1.94
VPS53YJL029C FMP42Q04991 504 aa2.92□□□□□ -1.94
VPS53YJL029C VAM3Q12241 283 aa2.92□□□□□ -1.94
VPS53YJL029C RPL21BQ12672 160 aaKnown RBP2.92□□□□□ -1.94
VPS53YJL029C URA3P03962 267 aa2.92□□□□□ -1.94
VPS53YJL029C PET122P10355 254 aa2.92□□□□□ -1.94
VPS53YJL029C MRP20P32387 263 aa2.92□□□□□ -1.94
VPS53YJL029C CDS1P38221 457 aa2.92□□□□□ -1.94
VPS53YJL029C TAX4P47030 604 aa2.92□□□□□ -1.94
VPS53YJL029C BXI1P48558 297 aa2.92□□□□□ -1.94
VPS53YJL029C YGR054WP53235 642 aaKnown RBP2.92□□□□□ -1.94
VPS53YJL029C COX18P53239 316 aa2.92□□□□□ -1.94
VPS53YJL029C YAP1802P53309 568 aa2.92□□□□□ -1.94
VPS53YJL029C GIM3P53900 129 aa2.92□□□□□ -1.94
VPS53YJL029C HSK3P69852 69 aa2.92□□□□□ -1.94
VPS53YJL029C MIX17Q03667 156 aa2.92□□□□□ -1.94
VPS53YJL029C MSH5Q12175 901 aa2.92□□□□□ -1.94
VPS53YJL029C YGR035W-AQ45U48 73 aa2.92□□□□□ -1.94
VPS53YJL029C YLR365WQ7LIF2 110 aa2.92□□□□□ -1.94
VPS53YJL029C CYC7P00045 113 aa2.91□□□□□ -1.94
VPS53YJL029C URA6P15700 204 aa2.91□□□□□ -1.94
VPS53YJL029C VMA5P31412 392 aaKnown RBP2.91□□□□□ -1.94
VPS53YJL029C UTP30P36144 274 aaKnown RBP2.91□□□□□ -1.94
VPS53YJL029C MED8P38304 223 aa2.91□□□□□ -1.94
VPS53YJL029C JLP2P40206 208 aa2.91□□□□□ -1.94
VPS53YJL029C ATG18P43601 500 aa2.91□□□□□ -1.94
VPS53YJL029C YDR179W-AQ03983 463 aa2.91□□□□□ -1.94
VPS53YJL029C YLR283WQ05867 314 aa2.91□□□□□ -1.94
VPS53YJL029C RGC1Q06108 1083 aaKnown RBP2.91□□□□□ -1.94
VPS53YJL029C ASR1Q06834 288 aa2.91□□□□□ -1.94
VPS53YJL029C RFM1Q12192 310 aa2.91□□□□□ -1.94
VPS53YJL029C TAL1P15019 335 aaKnown RBP2.91□□□□□ -1.94
VPS53YJL029C DPB2P24482 689 aaPredicted RBP2.91□□□□□ -1.94
VPS53YJL029C LSB5P25369 354 aa2.91□□□□□ -1.94
VPS53YJL029C RPL5P26321 297 aaKnown RBP2.91□□□□□ -1.94
VPS53YJL029C OCH1P31755 480 aa2.91□□□□□ -1.94
VPS53YJL029C ERG2P32352 222 aa2.91□□□□□ -1.94
VPS53YJL029C GPX2P38143 162 aa2.91□□□□□ -1.94
VPS53YJL029C YDL183CP48569 320 aa2.91□□□□□ -1.94
VPS53YJL029C YIP1P53039 248 aa2.91□□□□□ -1.94
VPS53YJL029C CPR8P53728 308 aa2.91□□□□□ -1.94
VPS53YJL029C SMX3P54999 86 aaPredicted RBP2.91□□□□□ -1.94
VPS53YJL029C VBA1Q04301 562 aa2.91□□□□□ -1.94
VPS53YJL029C FIT1Q04433 528 aa2.91□□□□□ -1.94
VPS53YJL029C NMA1Q06178 401 aaKnown RBP2.91□□□□□ -1.94
VPS53YJL029C ATG41Q12048 136 aa2.91□□□□□ -1.94
VPS53YJL029C TIR4Q12218 487 aaPredicted RBP2.91□□□□□ -1.94
VPS53YJL029C YOR029WQ12243 111 aa2.91□□□□□ -1.94
VPS53YJL029C SUS1Q6WNK7 96 aa2.91□□□□□ -1.94
VPS53YJL029C YMR31P19955 123 aa2.9□□□□□ -1.95
VPS53YJL029C PRE4P30657 266 aa2.9□□□□□ -1.95
VPS53YJL029C HOM6P31116 359 aaKnown RBP2.9□□□□□ -1.95
VPS53YJL029C PTC7P38797 343 aa2.9□□□□□ -1.95
VPS53YJL029C PSD1P39006 500 aa2.9□□□□□ -1.95
VPS53YJL029C FCY21P40039 528 aa2.9□□□□□ -1.95
VPS53YJL029C MRPL22P53881 309 aa2.9□□□□□ -1.95
VPS53YJL029C YDR114CQ04597 100 aa2.9□□□□□ -1.95
VPS53YJL029C YNG1Q08465 219 aa2.9□□□□□ -1.95
VPS53YJL029C YER190C-BP0CX94 160 aa2.9□□□□□ -1.95
VPS53YJL029C YEL077W-AP0CX95 160 aa2.9□□□□□ -1.95
VPS53YJL029C YGR296C-BP0CX96 160 aa2.9□□□□□ -1.95
VPS53YJL029C YPL283W-BP0CX97 160 aa2.9□□□□□ -1.95
VPS53YJL029C YPR204C-AP0CX98 160 aa2.9□□□□□ -1.95
VPS53YJL029C YFL068WP0CX99 160 aa2.9□□□□□ -1.95
VPS53YJL029C YLL066W-AP0CY00 160 aa2.9□□□□□ -1.95
VPS53YJL029C YLL067W-AP0CY01 160 aa2.9□□□□□ -1.95
VPS53YJL029C RPL24BP24000 155 aaKnown RBP2.9□□□□□ -1.95
VPS53YJL029C CPR4P25334 318 aa2.9□□□□□ -1.95
VPS53YJL029C FEN2P25621 512 aaKnown RBP2.9□□□□□ -1.95
VPS53YJL029C VMA8P32610 256 aaKnown RBP2.9□□□□□ -1.95
VPS53YJL029C VAM7P32912 316 aa2.9□□□□□ -1.95
VPS53YJL029C PMU1P36069 295 aa2.9□□□□□ -1.95
VPS53YJL029C PAM16P42949 149 aa2.9□□□□□ -1.95
VPS53YJL029C VHT1P53241 593 aa2.9□□□□□ -1.95
VPS53YJL029C KEI1Q06346 221 aa2.9□□□□□ -1.95
VPS53YJL029C YOL029CQ08187 201 aa2.9□□□□□ -1.95
VPS53YJL029C YOR292CQ08743 309 aa2.9□□□□□ -1.95
VPS53YJL029C TFC7Q12415 435 aa2.9□□□□□ -1.95
VPS53YJL029C REP2P03872 296 aa2.89□□□□□ -1.95
VPS53YJL029C RPL3P14126 387 aaKnown RBP2.89□□□□□ -1.95
VPS53YJL029C ERG3P32353 365 aa2.89□□□□□ -1.95
VPS53YJL029C HYM1P32464 399 aa2.89□□□□□ -1.95
VPS53YJL029C RPB7P34087 171 aa2.89□□□□□ -1.95
VPS53YJL029C YKL075CP36083 450 aa2.89□□□□□ -1.95
VPS53YJL029C MRPL27P36526 146 aaPredicted RBP2.89□□□□□ -1.95
VPS53YJL029C SWD3P38123 315 aa2.89□□□□□ -1.95
VPS53YJL029C IKI1P38874 309 aa2.89□□□□□ -1.95
VPS53YJL029C RFC2P40348 353 aa2.89□□□□□ -1.95
VPS53YJL029C RPA34P47006 233 aaPredicted RBP2.89□□□□□ -1.95
VPS53YJL029C ERG25P53045 309 aa2.89□□□□□ -1.95
VPS53YJL029C YMR166CQ03829 368 aa2.89□□□□□ -1.95
VPS53YJL029C TMA10Q06177 86 aa2.89□□□□□ -1.95
VPS53YJL029C YPD1Q07688 167 aa2.89□□□□□ -1.95
VPS53YJL029C HRD1Q08109 551 aa2.89□□□□□ -1.95
VPS53YJL029C YOR385WQ08909 290 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 82.4 ms