RNA–Protein interactions for RNA: YJL010C

NOP9, Transcript of Essential subunit of U3-containing 90S preribosome, yeast

Gene NOP9, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP9	YJL010C	RPL25	P04456	142 aa	Known RBP	0.44	□□□□□ -2.34
NOP9	YJL010C	YLR156W	P0CE96	114 aa		0.44	□□□□□ -2.34
NOP9	YJL010C	YLR159W	P0CE97	114 aa		0.44	□□□□□ -2.34
NOP9	YJL010C	YLR161W	P0CE98	114 aa		0.44	□□□□□ -2.34
NOP9	YJL010C	DDI2	P0CH63	225 aa		0.44	□□□□□ -2.34
NOP9	YJL010C	DDI3	P0CH64	225 aa		0.44	□□□□□ -2.34
NOP9	YJL010C	COQ1	P18900	473 aa		0.44	□□□□□ -2.34
NOP9	YJL010C	NTF2	P33331	125 aa	Known RBP	0.44	□□□□□ -2.34
NOP9	YJL010C	TRM5	P38793	499 aa		0.44	□□□□□ -2.34
NOP9	YJL010C	SVP26	P38869	228 aa		0.44	□□□□□ -2.34
NOP9	YJL010C	YER135C	P40082	130 aa		0.44	□□□□□ -2.34
NOP9	YJL010C	RTR1	P40084	226 aa	Predicted RBP	0.44	□□□□□ -2.34
NOP9	YJL010C	RPL13B	P40212	199 aa	Known RBP	0.44	□□□□□ -2.34
NOP9	YJL010C	YRB1	P41920	201 aa	Known RBP	0.44	□□□□□ -2.34
NOP9	YJL010C	FAR7	P43592	221 aa		0.44	□□□□□ -2.34
NOP9	YJL010C	RPC17	P47076	161 aa		0.44	□□□□□ -2.34
NOP9	YJL010C	ADO1	P47143	340 aa	Known RBP	0.44	□□□□□ -2.34
NOP9	YJL010C	BRR6	P53062	197 aa		0.44	□□□□□ -2.34
NOP9	YJL010C	YNL010W	P53981	241 aa	Known RBP	0.44	□□□□□ -2.34
NOP9	YJL010C	BNA7	Q04066	261 aa		0.44	□□□□□ -2.34
NOP9	YJL010C	RPL13A	Q12690	199 aa	Predicted RBP	0.44	□□□□□ -2.34
NOP9	YJL010C	SEY1	Q99287	776 aa		0.44	□□□□□ -2.34
NOP9	YJL010C	SPT3	P06844	337 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	RPL27B	P0C2H7	136 aa	Known RBP	0.43	□□□□□ -2.34
NOP9	YJL010C	GPA2	P10823	449 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	URA5	P13298	226 aa	Known RBP	0.43	□□□□□ -2.34
NOP9	YJL010C	GCN3	P14741	305 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	CKS1	P20486	150 aa	Known RBP	0.43	□□□□□ -2.34
NOP9	YJL010C	BET1	P22804	142 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	YGL010W	P25338	174 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	MEI4	P29467	408 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	CBT1	P36038	271 aa	Predicted RBP	0.43	□□□□□ -2.34
NOP9	YJL010C	ECM4	P36156	370 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	TVP38	P36164	337 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	URA8	P38627	578 aa	Predicted RBP	0.43	□□□□□ -2.34
NOP9	YJL010C	TVP23	P38962	199 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	YNL194C	P40169	301 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	ERJ5	P43613	295 aa	Predicted RBP	0.43	□□□□□ -2.34
NOP9	YJL010C	YJR149W	P47177	404 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	SWP1	Q02795	286 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	TRM12	Q04235	462 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	SPG3	Q04398	127 aa	Predicted RBP	0.43	□□□□□ -2.34
NOP9	YJL010C	CSI2	Q08054	341 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	PSF1	Q12488	208 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	TIM9	O74700	87 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	RPO26	P20435	155 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	PBN1	P25580	416 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	TFC1	P32367	649 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	PRP18	P33411	251 aa	Predicted RBP	0.43	□□□□□ -2.34
NOP9	YJL010C	TMA19	P35691	167 aa	Known RBP	0.43	□□□□□ -2.34
NOP9	YJL010C	UMP1	P38293	148 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	YBR209W	P38311	105 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	AIM2	P39721	246 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	BOL2	P53082	120 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	NUP49	Q02199	472 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	MZM1	Q03429	123 aa	Predicted RBP	0.43	□□□□□ -2.34
NOP9	YJL010C	YRA1	Q12159	226 aa	Known RBP	0.43	□□□□□ -2.34
NOP9	YJL010C	YDL180W	Q12301	547 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	YHR214C-E	Q8TGK0	99 aa		0.43	□□□□□ -2.34
NOP9	YJL010C	CYR1	P08678	2026 aa	Known RBP	0.42	□□□□□ -2.34
NOP9	YJL010C	REP2	P03872	296 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	KSS1	P14681	368 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	MRPL17	P36528	281 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	YBR220C	P38318	560 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	IRC22	P40006	225 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	ERG28	P40030	148 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	GVP36	P40531	326 aa	Known RBP	0.42	□□□□□ -2.34
NOP9	YJL010C	OTU1	P43558	301 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	YNR077C	P53758	84 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	DID2	P69771	204 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	CUE4	Q04201	117 aa	Predicted RBP	0.42	□□□□□ -2.34
NOP9	YJL010C	FUS2	Q05670	677 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	ANT1	Q06497	328 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	SPS18	P32572	300 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	PRX1	P34227	261 aa	Known RBP	0.42	□□□□□ -2.34
NOP9	YJL010C	YBR285W	P38354	144 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	GAA1	P39012	614 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	YRB2	P40517	327 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	RAD17	P48581	401 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	CGR1	P53188	120 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	CUS2	P53830	285 aa	Predicted RBP	0.42	□□□□□ -2.34
NOP9	YJL010C	YDR274C	P87283	123 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	YMR226C	Q05016	267 aa	Known RBP	0.42	□□□□□ -2.34
NOP9	YJL010C	YLR162W	Q06235	118 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	GPM2	Q12008	311 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	RIO1	Q12196	484 aa	Known RBP	0.42	□□□□□ -2.34
NOP9	YJL010C	YKL183C-A	Q3E765	70 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	NCB2	Q92317	146 aa		0.42	□□□□□ -2.34
NOP9	YJL010C	PDR18	P53756	1333 aa		0.41	□□□□□ -2.34
NOP9	YJL010C	IKI3	Q06706	1349 aa	Known RBP	0.41	□□□□□ -2.34
NOP9	YJL010C	YHR139C-A	O13536	103 aa		0.41	□□□□□ -2.34
NOP9	YJL010C	HTB1	P02293	131 aa	Known RBP	0.41	□□□□□ -2.34
NOP9	YJL010C	HTB2	P02294	131 aa		0.41	□□□□□ -2.34
NOP9	YJL010C	CDC33	P07260	213 aa	Known RBP	0.41	□□□□□ -2.34
NOP9	YJL010C	MAG1	P22134	296 aa	Known RBP	0.41	□□□□□ -2.34
NOP9	YJL010C	NTG1	P31378	399 aa		0.41	□□□□□ -2.34
NOP9	YJL010C	SRY1	P36007	326 aa		0.41	□□□□□ -2.34
NOP9	YJL010C	SIP3	P38717	1229 aa		0.41	□□□□□ -2.34
NOP9	YJL010C	HMF1	P40037	129 aa	Known RBP	0.41	□□□□□ -2.34
NOP9	YJL010C	MSS2	P40990	351 aa		0.41	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms