RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W HUG1Q6Q5K6 68 aa9.57□□□□□ -0.88
SIM1YIL123W ECM25P32525 599 aa9.56□□□□□ -0.88
SIM1YIL123W YJR012CP47087 207 aa9.56□□□□□ -0.88
SIM1YIL123W YGL260WP53056 76 aa9.56□□□□□ -0.88
SIM1YIL123W ACS1Q01574 713 aa9.56□□□□□ -0.88
SIM1YIL123W TSA2Q04120 196 aa9.56□□□□□ -0.88
SIM1YIL123W ASM4Q05166 528 aa9.56□□□□□ -0.88
SIM1YIL123W YOR192C-CQ3E736 78 aa9.56□□□□□ -0.88
SIM1YIL123W SRB6P32570 121 aa9.56□□□□□ -0.88
SIM1YIL123W YOX1P34161 385 aa9.56□□□□□ -0.88
SIM1YIL123W EMC5P40540 141 aa9.56□□□□□ -0.88
SIM1YIL123W YPL067CQ02754 198 aa9.56□□□□□ -0.88
SIM1YIL123W YOL118CQ08259 102 aa9.56□□□□□ -0.88
SIM1YIL123W RNH203Q12338 110 aa9.56□□□□□ -0.88
SIM1YIL123W LDS1P31379 325 aa9.55□□□□□ -0.88
SIM1YIL123W YEA4P40004 342 aa9.55□□□□□ -0.88
SIM1YIL123W UBC13P52490 153 aa9.55□□□□□ -0.88
SIM1YIL123W ALG12P53730 551 aa9.55□□□□□ -0.88
SIM1YIL123W APJ1P53940 528 aa9.55□□□□□ -0.88
SIM1YIL123W YCL001W-AP87012 153 aa9.55□□□□□ -0.88
SIM1YIL123W FIT1Q04433 528 aa9.55□□□□□ -0.88
SIM1YIL123W DPB4Q04603 196 aaKnown RBP9.55□□□□□ -0.88
SIM1YIL123W CRR1Q05790 422 aa9.55□□□□□ -0.88
SIM1YIL123W YOR292CQ08743 309 aa9.55□□□□□ -0.88
SIM1YIL123W GCN1P33892 2672 aaKnown RBP9.54□□□□□ -0.88
SIM1YIL123W CNB1P25296 175 aa9.54□□□□□ -0.88
SIM1YIL123W ECM31P38122 312 aa9.54□□□□□ -0.88
SIM1YIL123W YHL037CP38733 133 aa9.54□□□□□ -0.88
SIM1YIL123W SLM1P40485 686 aa9.54□□□□□ -0.88
SIM1YIL123W HED1Q03937 162 aa9.54□□□□□ -0.88
SIM1YIL123W YDR415CQ04033 374 aaPredicted RBP9.54□□□□□ -0.88
SIM1YIL123W ALG6Q12001 544 aaKnown RBP9.54□□□□□ -0.88
SIM1YIL123W FCY22Q12119 530 aa9.54□□□□□ -0.88
SIM1YIL123W PRS5Q12265 496 aaKnown RBP9.54□□□□□ -0.88
SIM1YIL123W COQ2P32378 372 aa9.53□□□□□ -0.88
SIM1YIL123W SLM6P38343 150 aa9.53□□□□□ -0.88
SIM1YIL123W AIR1P40507 360 aaKnown RBP9.53□□□□□ -0.88
SIM1YIL123W MSO1P53604 210 aaKnown RBP9.53□□□□□ -0.88
SIM1YIL123W FMP41P53889 259 aaKnown RBP9.53□□□□□ -0.88
SIM1YIL123W RIM9Q04734 239 aa9.53□□□□□ -0.88
SIM1YIL123W PRP11Q07350 266 aaPredicted RBP9.53□□□□□ -0.88
SIM1YIL123W PAM18Q07914 168 aa9.53□□□□□ -0.88
SIM1YIL123W SDO1Q07953 250 aaKnown RBP9.53□□□□□ -0.88
SIM1YIL123W COX17Q12287 69 aa9.53□□□□□ -0.88
SIM1YIL123W VMA9Q3E7B6 73 aa9.53□□□□□ -0.88
SIM1YIL123W MAK32P23060 363 aa9.52□□□□□ -0.89
SIM1YIL123W RPI1P23250 407 aaKnown RBP9.52□□□□□ -0.89
SIM1YIL123W MRS4P23500 304 aa9.52□□□□□ -0.89
SIM1YIL123W YFL051CP43552 160 aa9.52□□□□□ -0.89
SIM1YIL123W YMR279CQ03263 540 aa9.52□□□□□ -0.89
SIM1YIL123W SHG1P38337 142 aa9.51□□□□□ -0.89
SIM1YIL123W RFC2P40348 353 aa9.51□□□□□ -0.89
SIM1YIL123W GON7P46984 123 aa9.51□□□□□ -0.89
SIM1YIL123W ERV25P54837 211 aaKnown RBP9.51□□□□□ -0.89
SIM1YIL123W YMR082CQ04276 118 aa9.51□□□□□ -0.89
SIM1YIL123W LIP2Q06005 328 aa9.51□□□□□ -0.89
SIM1YIL123W SWT1Q12104 458 aa9.51□□□□□ -0.89
SIM1YIL123W DGK1Q12382 290 aa9.51□□□□□ -0.89
SIM1YIL123W AIM45Q12480 344 aaKnown RBP9.51□□□□□ -0.89
SIM1YIL123W COA2Q3E823 68 aa9.51□□□□□ -0.89
SIM1YIL123W HBN1Q96VH4 193 aa9.51□□□□□ -0.89
SIM1YIL123W TDH1P00360 332 aaKnown RBP9.5□□□□□ -0.89
SIM1YIL123W MSK1P32048 576 aa9.5□□□□□ -0.89
SIM1YIL123W YKL162CP36052 402 aa9.5□□□□□ -0.89
SIM1YIL123W RMD6P39975 231 aa9.5□□□□□ -0.89
SIM1YIL123W YIL024CP40543 189 aa9.5□□□□□ -0.89
SIM1YIL123W MCM22P47167 239 aa9.5□□□□□ -0.89
SIM1YIL123W CWC25P53854 179 aaKnown RBP9.5□□□□□ -0.89
SIM1YIL123W HSK3P69852 69 aa9.5□□□□□ -0.89
SIM1YIL123W MRPS17Q03246 237 aaPredicted RBP9.5□□□□□ -0.89
SIM1YIL123W MRL1Q06815 381 aa9.5□□□□□ -0.89
SIM1YIL123W GAT3Q07928 141 aa9.5□□□□□ -0.89
SIM1YIL123W RPS23AP0CX29 145 aaKnown RBP9.49□□□□□ -0.89
SIM1YIL123W RPS23BP0CX30 145 aa9.49□□□□□ -0.89
SIM1YIL123W YBR220CP38318 560 aa9.49□□□□□ -0.89
SIM1YIL123W YCK3P39962 524 aa9.49□□□□□ -0.89
SIM1YIL123W SPC25P40014 221 aa9.49□□□□□ -0.89
SIM1YIL123W YMR090WQ04304 227 aaKnown RBP9.49□□□□□ -0.89
SIM1YIL123W HOF1Q05080 669 aa9.49□□□□□ -0.89
SIM1YIL123W TY1A-DR3Q12441 440 aa9.49□□□□□ -0.89
SIM1YIL123W GDH1P07262 454 aaKnown RBP9.48□□□□□ -0.89
SIM1YIL123W ERV1P27882 189 aa9.48□□□□□ -0.89
SIM1YIL123W SIP1P32578 815 aa9.48□□□□□ -0.89
SIM1YIL123W PET100P38958 111 aa9.48□□□□□ -0.89
SIM1YIL123W YFH1Q07540 174 aa9.48□□□□□ -0.89
SIM1YIL123W HRD1Q08109 551 aa9.48□□□□□ -0.89
SIM1YIL123W Q0142Q9ZZW4 58 aa9.48□□□□□ -0.89
SIM1YIL123W PCL7P40186 285 aa9.48□□□□□ -0.89
SIM1YIL123W QRI1P43123 477 aaKnown RBP9.48□□□□□ -0.89
SIM1YIL123W YJR056CP47115 236 aa9.48□□□□□ -0.89
SIM1YIL123W GNP1P48813 663 aa9.48□□□□□ -0.89
SIM1YIL123W YNR066CP53752 436 aa9.48□□□□□ -0.89
SIM1YIL123W DMA2P53924 522 aa9.48□□□□□ -0.89
SIM1YIL123W CRZ1P53968 678 aa9.48□□□□□ -0.89
SIM1YIL123W COX19Q3E731 98 aa9.48□□□□□ -0.89
SIM1YIL123W YBR255C-AQ3E776 120 aa9.48□□□□□ -0.89
SIM1YIL123W ISC10P32645 267 aa9.47□□□□□ -0.89
SIM1YIL123W CPR5P35176 225 aa9.47□□□□□ -0.89
SIM1YIL123W IKI1P38874 309 aa9.47□□□□□ -0.89
SIM1YIL123W YPL264CQ08980 353 aa9.47□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms