RNA–Protein interactions for RNA: YGR239C

PEX21, Transcript of Peroxin required for peroxisomal matrix protein targeting, yeast

Gene PEX21, Length 867 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX21	YGR239C	YJR146W	P47174	117 aa		2.73	□□□□□ -1.97
PEX21	YGR239C	RPL9B	P51401	191 aa	Known RBP	2.73	□□□□□ -1.97
PEX21	YGR239C	LSM7	P53905	115 aa	Known RBP	2.73	□□□□□ -1.97
PEX21	YGR239C	PET191	Q02772	108 aa		2.73	□□□□□ -1.97
PEX21	YGR239C	HRT1	Q08273	121 aa		2.73	□□□□□ -1.97
PEX21	YGR239C	SWR1	Q05471	1514 aa		2.73	□□□□□ -1.97
PEX21	YGR239C	MSW1	P04803	379 aa		2.72	□□□□□ -1.97
PEX21	YGR239C	RPL26A	P05743	127 aa	Known RBP	2.72	□□□□□ -1.97
PEX21	YGR239C	SMD3	P43321	101 aa	Known RBP	2.72	□□□□□ -1.97
PEX21	YGR239C	RPL26B	P53221	127 aa	Known RBP	2.72	□□□□□ -1.97
PEX21	YGR239C	GRE1	Q08969	168 aa		2.72	□□□□□ -1.97
PEX21	YGR239C	YPL162C	Q12042	273 aa		2.72	□□□□□ -1.97
PEX21	YGR239C	CDC8	P00572	216 aa		2.71	□□□□□ -1.98
PEX21	YGR239C	CDC7	P06243	507 aa		2.71	□□□□□ -1.98
PEX21	YGR239C	YLR156W	P0CE96	114 aa		2.71	□□□□□ -1.98
PEX21	YGR239C	YLR159W	P0CE97	114 aa		2.71	□□□□□ -1.98
PEX21	YGR239C	YLR161W	P0CE98	114 aa		2.71	□□□□□ -1.98
PEX21	YGR239C	CCA1	P21269	546 aa		2.71	□□□□□ -1.98
PEX21	YGR239C	POP4	P38336	279 aa		2.71	□□□□□ -1.98
PEX21	YGR239C	MNN5	P46982	586 aa		2.71	□□□□□ -1.98
PEX21	YGR239C	IGO2	Q9P305	131 aa		2.71	□□□□□ -1.98
PEX21	YGR239C	SEC4	P07560	215 aa	Known RBP	2.7	□□□□□ -1.98
PEX21	YGR239C	PUT1	P09368	476 aa		2.7	□□□□□ -1.98
PEX21	YGR239C	ATP7	P30902	174 aa		2.7	□□□□□ -1.98
PEX21	YGR239C	SCM4	P32564	187 aa		2.7	□□□□□ -1.98
PEX21	YGR239C	TCA17	P32613	152 aa		2.7	□□□□□ -1.98
PEX21	YGR239C	CTR2	P38865	189 aa		2.7	□□□□□ -1.98
PEX21	YGR239C	SEC72	P39742	193 aa	Known RBP	2.7	□□□□□ -1.98
PEX21	YGR239C	DID2	P69771	204 aa		2.7	□□□□□ -1.98
PEX21	YGR239C	ATO3	Q12359	275 aa		2.7	□□□□□ -1.98
PEX21	YGR239C	CAF4	P36130	643 aa		2.69	□□□□□ -1.98
PEX21	YGR239C	YER034W	P40022	185 aa	Known RBP	2.69	□□□□□ -1.98
PEX21	YGR239C	HMF1	P40037	129 aa	Known RBP	2.69	□□□□□ -1.98
PEX21	YGR239C	AIF1	P52923	378 aa		2.69	□□□□□ -1.98
PEX21	YGR239C	YGR050C	P53231	118 aa		2.69	□□□□□ -1.98
PEX21	YGR239C	TRM12	Q04235	462 aa		2.69	□□□□□ -1.98
PEX21	YGR239C	IKI3	Q06706	1349 aa	Known RBP	2.68	□□□□□ -1.98
PEX21	YGR239C	SIR2	P06700	562 aa		2.68	□□□□□ -1.98
PEX21	YGR239C	MRS1	P07266	363 aa		2.68	□□□□□ -1.98
PEX21	YGR239C	KSS1	P14681	368 aa		2.68	□□□□□ -1.98
PEX21	YGR239C	GRX2	P17695	143 aa	Known RBP	2.68	□□□□□ -1.98
PEX21	YGR239C	MRPL49	P40858	161 aa	Predicted RBP	2.68	□□□□□ -1.98
PEX21	YGR239C	CIS3	P47001	227 aa		2.68	□□□□□ -1.98
PEX21	YGR239C	YNL010W	P53981	241 aa	Known RBP	2.68	□□□□□ -1.98
PEX21	YGR239C	YNG1	Q08465	219 aa		2.68	□□□□□ -1.98
PEX21	YGR239C	VPS68	Q12016	184 aa		2.68	□□□□□ -1.98
PEX21	YGR239C	PSF1	Q12488	208 aa		2.68	□□□□□ -1.98
PEX21	YGR239C	YFR032C-B	Q8TGU2	87 aa		2.68	□□□□□ -1.98
PEX21	YGR239C	MAG1	P22134	296 aa	Known RBP	2.67	□□□□□ -1.98
PEX21	YGR239C	UTR5	P32630	166 aa		2.67	□□□□□ -1.98
PEX21	YGR239C	UTP30	P36144	274 aa	Known RBP	2.67	□□□□□ -1.98
PEX21	YGR239C	DIA1	P54005	336 aa		2.67	□□□□□ -1.98
PEX21	YGR239C	NOC4	Q06512	552 aa	Predicted RBP	2.67	□□□□□ -1.98
PEX21	YGR239C	USB1	Q12208	290 aa	Known RBP	2.67	□□□□□ -1.98
PEX21	YGR239C	SPA2	P23201	1466 aa	Known RBP	2.66	□□□□□ -1.98
PEX21	YGR239C	REP2	P03872	296 aa		2.66	□□□□□ -1.98
PEX21	YGR239C	FBA1	P14540	359 aa	Known RBP	2.66	□□□□□ -1.98
PEX21	YGR239C	TRX3	P25372	127 aa		2.66	□□□□□ -1.98
PEX21	YGR239C	RSM25	P40496	264 aa		2.66	□□□□□ -1.98
PEX21	YGR239C	RTC4	P53850	401 aa		2.66	□□□□□ -1.98
PEX21	YGR239C	PRM15	Q03262	622 aa		2.66	□□□□□ -1.98
PEX21	YGR239C	SPG3	Q04398	127 aa	Predicted RBP	2.66	□□□□□ -1.98
PEX21	YGR239C	YLR036C	Q07986	203 aa		2.66	□□□□□ -1.98
PEX21	YGR239C	TY1B-DR4	Q07793	1604 aa		2.65	□□□□□ -1.98
PEX21	YGR239C	TCB3	Q03640	1545 aa	Known RBP	2.65	□□□□□ -1.99
PEX21	YGR239C	BET1	P22804	142 aa		2.65	□□□□□ -1.99
PEX21	YGR239C	SCO1	P23833	295 aa		2.65	□□□□□ -1.99
PEX21	YGR239C	GLE2	P40066	365 aa		2.65	□□□□□ -1.99
PEX21	YGR239C	PDS1	P40316	373 aa	Predicted RBP	2.65	□□□□□ -1.99
PEX21	YGR239C	COS6	P53344	381 aa		2.65	□□□□□ -1.99
PEX21	YGR239C	TSC3	Q3E790	80 aa		2.65	□□□□□ -1.99
PEX21	YGR239C	SNF6	P18888	332 aa		2.64	□□□□□ -1.99
PEX21	YGR239C	MRPS28	P21771	286 aa		2.64	□□□□□ -1.99
PEX21	YGR239C	CLB6	P32943	380 aa		2.64	□□□□□ -1.99
PEX21	YGR239C	YGR219W	P53307	113 aa		2.64	□□□□□ -1.99
PEX21	YGR239C	COG5	P53951	403 aa		2.64	□□□□□ -1.99
PEX21	YGR239C	RGM1	Q00453	211 aa		2.64	□□□□□ -1.99
PEX21	YGR239C	SNO1	Q03144	224 aa		2.64	□□□□□ -1.99
PEX21	YGR239C	FUS2	Q05670	677 aa		2.64	□□□□□ -1.99
PEX21	YGR239C	GRX8	Q05926	109 aa		2.64	□□□□□ -1.99
PEX21	YGR239C	NEJ1	Q06148	342 aa		2.64	□□□□□ -1.99
PEX21	YGR239C	ARR2	Q06597	130 aa		2.64	□□□□□ -1.99
PEX21	YGR239C	YOL024W	Q08172	172 aa		2.64	□□□□□ -1.99
PEX21	YGR239C	MCP1	Q12106	302 aa		2.64	□□□□□ -1.99
PEX21	YGR239C	URA5	P13298	226 aa	Known RBP	2.63	□□□□□ -1.99
PEX21	YGR239C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.63	□□□□□ -1.99	not detected
PEX21	YGR239C	CKS1	P20486	150 aa	Known RBP	2.63	□□□□□ -1.99
PEX21	YGR239C	TAH1	P25638	111 aa	Predicted RBP	2.63	□□□□□ -1.99
PEX21	YGR239C	SHG1	P38337	142 aa		2.63	□□□□□ -1.99
PEX21	YGR239C	YHR180W	P38868	163 aa		2.63	□□□□□ -1.99
PEX21	YGR239C	EGD2	P38879	174 aa	Known RBP	2.63	□□□□□ -1.99
PEX21	YGR239C	YET3	Q07451	203 aa		2.63	□□□□□ -1.99
PEX21	YGR239C	MBF1	O14467	151 aa	Known RBP	2.62	□□□□□ -1.99
PEX21	YGR239C	RME1	P32338	300 aa	Known RBP	2.62	□□□□□ -1.99
PEX21	YGR239C	SEC17	P32602	292 aa		2.62	□□□□□ -1.99
PEX21	YGR239C	PGD1	P40356	397 aa		2.62	□□□□□ -1.99
PEX21	YGR239C	EAF6	P47128	113 aa		2.62	□□□□□ -1.99
PEX21	YGR239C	SWP1	Q02795	286 aa		2.62	□□□□□ -1.99
PEX21	YGR239C	YDR249C	Q03787	373 aa		2.62	□□□□□ -1.99
PEX21	YGR239C	EMC6	Q12431	108 aa		2.62	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms