RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C DIM1P41819 318 aaKnown RBP3.05□□□□□ -1.92
OTU1YFL044C YJL016WP47072 561 aa3.05□□□□□ -1.92
OTU1YFL044C RMR1P53060 241 aa3.05□□□□□ -1.92
OTU1YFL044C YGL114WP53134 725 aa3.05□□□□□ -1.92
OTU1YFL044C PNC1P53184 216 aaKnown RBP3.05□□□□□ -1.92
OTU1YFL044C RNH201P53942 307 aa3.05□□□□□ -1.92
OTU1YFL044C ASI3P53983 676 aa3.05□□□□□ -1.92
OTU1YFL044C BET5Q03630 159 aa3.05□□□□□ -1.92
OTU1YFL044C YMR166CQ03829 368 aa3.05□□□□□ -1.92
OTU1YFL044C GAL83Q04739 417 aa3.05□□□□□ -1.92
OTU1YFL044C FMP42Q04991 504 aa3.05□□□□□ -1.92
OTU1YFL044C YOR029WQ12243 111 aa3.05□□□□□ -1.92
OTU1YFL044C SGA1P08019 549 aa3.04□□□□□ -1.92
OTU1YFL044C YCR043CP25361 127 aa3.04□□□□□ -1.92
OTU1YFL044C PET18P25362 215 aa3.04□□□□□ -1.92
OTU1YFL044C LSB5P25369 354 aa3.04□□□□□ -1.92
OTU1YFL044C MSK1P32048 576 aa3.04□□□□□ -1.92
OTU1YFL044C DPH5P32469 300 aaPredicted RBP3.04□□□□□ -1.92
OTU1YFL044C ECT1P33412 323 aa3.04□□□□□ -1.92
OTU1YFL044C TMA19P35691 167 aaKnown RBP3.04□□□□□ -1.92
OTU1YFL044C ANR2P36090 516 aaPredicted RBP3.04□□□□□ -1.92
OTU1YFL044C YKR015CP36111 568 aa3.04□□□□□ -1.92
OTU1YFL044C PDX3P38075 228 aaKnown RBP3.04□□□□□ -1.92
OTU1YFL044C DDI1P40087 428 aa3.04□□□□□ -1.92
OTU1YFL044C GWT1P47026 490 aa3.04□□□□□ -1.92
OTU1YFL044C AVT4P50944 713 aa3.04□□□□□ -1.92
OTU1YFL044C NRK1P53915 240 aa3.04□□□□□ -1.92
OTU1YFL044C COG5P53951 403 aa3.04□□□□□ -1.92
OTU1YFL044C VPS71Q03433 280 aa3.04□□□□□ -1.92
OTU1YFL044C ECM18Q04623 453 aa3.04□□□□□ -1.92
OTU1YFL044C THP3Q12049 470 aaKnown RBP3.04□□□□□ -1.92
OTU1YFL044C PCL9Q12477 304 aa3.04□□□□□ -1.92
OTU1YFL044C AIM45Q12480 344 aaKnown RBP3.04□□□□□ -1.92
OTU1YFL044C TPK3P05986 398 aa3.03□□□□□ -1.92
OTU1YFL044C SIR2P06700 562 aa3.03□□□□□ -1.92
OTU1YFL044C TIP1P27654 210 aaPredicted RBP3.03□□□□□ -1.92
OTU1YFL044C OAC1P32332 324 aa3.03□□□□□ -1.92
OTU1YFL044C HMX1P32339 317 aa3.03□□□□□ -1.92
OTU1YFL044C ZUO1P32527 433 aaKnown RBP3.03□□□□□ -1.92
OTU1YFL044C SWD2P36104 329 aaPredicted RBP3.03□□□□□ -1.92
OTU1YFL044C SIM1P40472 476 aa3.03□□□□□ -1.92
OTU1YFL044C VOA1P53262 265 aa3.03□□□□□ -1.92
OTU1YFL044C PXR1P53335 271 aaPredicted RBP3.03□□□□□ -1.92
OTU1YFL044C AAH1P53909 347 aa3.03□□□□□ -1.92
OTU1YFL044C TIM11P81449 96 aaPredicted RBP3.03□□□□□ -1.92
OTU1YFL044C YKR005CQ02203 525 aa3.03□□□□□ -1.92
OTU1YFL044C ODC1Q03028 310 aa3.03□□□□□ -1.92
OTU1YFL044C CAB5Q03941 241 aa3.03□□□□□ -1.92
OTU1YFL044C YMR315WQ04869 349 aaKnown RBP3.03□□□□□ -1.92
OTU1YFL044C YMR226CQ05016 267 aaKnown RBP3.03□□□□□ -1.92
OTU1YFL044C LDS2Q08218 356 aa3.03□□□□□ -1.92
OTU1YFL044C PST2Q12335 198 aaKnown RBP3.03□□□□□ -1.92
OTU1YFL044C YIL002W-AQ3E7Z5 69 aa3.03□□□□□ -1.92
OTU1YFL044C GDH1P07262 454 aaKnown RBP3.02□□□□□ -1.93
OTU1YFL044C BGL2P15703 313 aaKnown RBP3.02□□□□□ -1.93
OTU1YFL044C TOM40P23644 387 aaKnown RBP3.02□□□□□ -1.93
OTU1YFL044C TOA2P32774 122 aa3.02□□□□□ -1.93
OTU1YFL044C ATP3P38077 311 aaKnown RBP3.02□□□□□ -1.93
OTU1YFL044C ECM31P38122 312 aa3.02□□□□□ -1.93
OTU1YFL044C YHR122WP38829 231 aa3.02□□□□□ -1.93
OTU1YFL044C THO1P40040 218 aaKnown RBP3.02□□□□□ -1.93
OTU1YFL044C TIR3P40552 269 aa3.02□□□□□ -1.93
OTU1YFL044C PIR5P46999 287 aa3.02□□□□□ -1.93
OTU1YFL044C RIB4P50861 169 aaPredicted RBP3.02□□□□□ -1.93
OTU1YFL044C YGL185CP53100 379 aa3.02□□□□□ -1.93
OTU1YFL044C YGL159WP53110 370 aa3.02□□□□□ -1.93
OTU1YFL044C YLR152CP54072 576 aa3.02□□□□□ -1.93
OTU1YFL044C SMP3Q04174 516 aa3.02□□□□□ -1.93
OTU1YFL044C YDR114CQ04597 100 aa3.02□□□□□ -1.93
OTU1YFL044C LIP2Q06005 328 aa3.02□□□□□ -1.93
OTU1YFL044C MRPL35Q06678 367 aa3.02□□□□□ -1.93
OTU1YFL044C TIM18Q08749 192 aa3.02□□□□□ -1.93
OTU1YFL044C YGL041W-AP0C5N3 154 aa3.01□□□□□ -1.93
OTU1YFL044C YLL053CP0CD98 152 aa3.01□□□□□ -1.93
OTU1YFL044C RPL18AP0CX49 186 aaKnown RBP3.01□□□□□ -1.93
OTU1YFL044C RPL18BP0CX50 186 aaKnown RBP3.01□□□□□ -1.93
OTU1YFL044C FBA1P14540 359 aaKnown RBP3.01□□□□□ -1.93
OTU1YFL044C UBC8P28263 218 aa3.01□□□□□ -1.93
OTU1YFL044C YPS1P32329 569 aa3.01□□□□□ -1.93
OTU1YFL044C ZRT3P34240 503 aa3.01□□□□□ -1.93
OTU1YFL044C NAT2P37293 288 aa3.01□□□□□ -1.93
OTU1YFL044C RIO2P40160 425 aaKnown RBP3.01□□□□□ -1.93
OTU1YFL044C DLS1P40366 167 aa3.01□□□□□ -1.93
OTU1YFL044C LOC1P43586 204 aaPredicted RBP3.01□□□□□ -1.93
OTU1YFL044C ERJ5P43613 295 aaPredicted RBP3.01□□□□□ -1.93
OTU1YFL044C MRH4P53166 561 aa3.01□□□□□ -1.93
OTU1YFL044C POP6P53218 158 aa3.01□□□□□ -1.93
OTU1YFL044C OKP1P53298 406 aa3.01□□□□□ -1.93
OTU1YFL044C SAY1P53324 424 aa3.01□□□□□ -1.93
OTU1YFL044C SPG4Q04438 115 aa3.01□□□□□ -1.93
OTU1YFL044C MRX9Q07349 420 aaKnown RBP3.01□□□□□ -1.93
OTU1YFL044C BBP1Q12365 385 aa3.01□□□□□ -1.93
OTU1YFL044C YPL119C-AQ3E751 87 aa3.01□□□□□ -1.93
OTU1YFL044C CDC28P00546 298 aaKnown RBP3□□□□□ -1.93
OTU1YFL044C COX9P07255 59 aa3□□□□□ -1.93
OTU1YFL044C SNF4P12904 322 aa3□□□□□ -1.93
OTU1YFL044C PHO85P17157 305 aa3□□□□□ -1.93
OTU1YFL044C PUT3P25502 979 aaPredicted RBP3□□□□□ -1.93
OTU1YFL044C MIG1P27705 504 aa3□□□□□ -1.93
OTU1YFL044C RAD23P32628 398 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 241.9 ms