RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C EDC2P40023 145 aaPredicted RBP2.31□□□□□ -2.04
MSH4YFL003C YDR248CQ03786 193 aa2.31□□□□□ -2.04
MSH4YFL003C ATG5Q12380 294 aa2.31□□□□□ -2.04
MSH4YFL003C YBL008W-AQ3E821 79 aa2.31□□□□□ -2.04
MSH4YFL003C YHR139C-AO13536 103 aa2.3□□□□□ -2.04
MSH4YFL003C CUP1-1P0CX80 61 aa2.3□□□□□ -2.04
MSH4YFL003C CUP1-2P0CX81 61 aa2.3□□□□□ -2.04
MSH4YFL003C GCY1P14065 312 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
MSH4YFL003C GPI18P38211 433 aa2.3□□□□□ -2.04
MSH4YFL003C ECM14P38836 430 aa2.3□□□□□ -2.04
MSH4YFL003C FAR7P43592 221 aa2.3□□□□□ -2.04
MSH4YFL003C ARO80Q04052 950 aa2.3□□□□□ -2.04
MSH4YFL003C YML096WQ04489 525 aa2.3□□□□□ -2.04
MSH4YFL003C QCR2P07257 368 aa2.3□□□□□ -2.04
MSH4YFL003C SEC4P07560 215 aaKnown RBP2.3□□□□□ -2.04
MSH4YFL003C SEO1P39709 593 aa2.3□□□□□ -2.04
MSH4YFL003C SYS1P41544 203 aa2.3□□□□□ -2.04
MSH4YFL003C YGL262WP53054 175 aa2.3□□□□□ -2.04
MSH4YFL003C SWT21P53873 357 aaPredicted RBP2.3□□□□□ -2.04
MSH4YFL003C PET191Q02772 108 aa2.3□□□□□ -2.04
MSH4YFL003C NOC4Q06512 552 aaPredicted RBP2.3□□□□□ -2.04
MSH4YFL003C YPS3Q12303 508 aa2.3□□□□□ -2.04
MSH4YFL003C NUM1Q00402 2748 aa2.29□□□□□ -2.04
MSH4YFL003C CPT1P17898 393 aa2.29□□□□□ -2.04
MSH4YFL003C ASP1P38986 381 aaPredicted RBP2.29□□□□□ -2.04
MSH4YFL003C MRPL49P40858 161 aaPredicted RBP2.29□□□□□ -2.04
MSH4YFL003C YGL118CP53132 145 aa2.29□□□□□ -2.04
MSH4YFL003C GIS2P53849 153 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
MSH4YFL003C YNL247WP53852 767 aaKnown RBP2.29□□□□□ -2.04
MSH4YFL003C YPR117WQ06116 2489 aa2.29□□□□□ -2.04
MSH4YFL003C ZWF1P11412 505 aaKnown RBP2.29□□□□□ -2.04
MSH4YFL003C EPT1P22140 391 aa2.29□□□□□ -2.04
MSH4YFL003C APS1P35181 156 aa2.29□□□□□ -2.04
MSH4YFL003C PRY2P36110 329 aa2.29□□□□□ -2.04
MSH4YFL003C ECM13P38195 257 aa2.29□□□□□ -2.04
MSH4YFL003C GTR2P53290 341 aa2.29□□□□□ -2.04
MSH4YFL003C GRX8Q05926 109 aa2.29□□□□□ -2.04
MSH4YFL003C MRS1P07266 363 aa2.28□□□□□ -2.04
MSH4YFL003C GRX2P17695 143 aaKnown RBP2.28□□□□□ -2.04
MSH4YFL003C MEI4P29467 408 aa2.28□□□□□ -2.04
MSH4YFL003C YKR041WP36134 250 aa2.28□□□□□ -2.04
MSH4YFL003C MAK5P38112 773 aaPredicted RBP2.28□□□□□ -2.04
MSH4YFL003C YHL044WP38727 235 aa2.28□□□□□ -2.04
MSH4YFL003C YIL054WP40524 105 aa2.28□□□□□ -2.04
MSH4YFL003C UFD1P53044 361 aa2.28□□□□□ -2.04
MSH4YFL003C ERV29P53337 310 aa2.28□□□□□ -2.04
MSH4YFL003C RTC4P53850 401 aa2.28□□□□□ -2.04
MSH4YFL003C DID2P69771 204 aa2.28□□□□□ -2.04
MSH4YFL003C YPL039WQ03080 316 aa2.28□□□□□ -2.04
MSH4YFL003C TIM22Q12328 207 aa2.28□□□□□ -2.04
MSH4YFL003C FIG1P38224 298 aa2.28□□□□□ -2.04
MSH4YFL003C YER189WP40104 122 aa2.28□□□□□ -2.04
MSH4YFL003C RPE1P46969 238 aa2.28□□□□□ -2.04
MSH4YFL003C EMI1Q04406 187 aa2.28□□□□□ -2.04
MSH4YFL003C YMR315WQ04869 349 aaKnown RBP2.28□□□□□ -2.04
MSH4YFL003C INM2Q05533 292 aa2.28□□□□□ -2.04
MSH4YFL003C NNT1Q05874 261 aa2.28□□□□□ -2.04
MSH4YFL003C GGA1Q06336 557 aa2.28□□□□□ -2.04
MSH4YFL003C YPR011CQ12251 326 aa2.28□□□□□ -2.04
MSH4YFL003C YBL112CQ3E7Y4 105 aa2.28□□□□□ -2.04
MSH4YFL003C SWI1P09547 1314 aa2.28□□□□□ -2.05
MSH4YFL003C RPO41P13433 1351 aaKnown RBP2.27□□□□□ -2.05
MSH4YFL003C TAH1P25638 111 aaPredicted RBP2.27□□□□□ -2.05
MSH4YFL003C YBL081WP38180 368 aaKnown RBP2.27□□□□□ -2.05
MSH4YFL003C CAT5P41735 233 aa2.27□□□□□ -2.05
MSH4YFL003C YJL028WP47062 111 aa2.27□□□□□ -2.05
MSH4YFL003C ILM1P47155 203 aa2.27□□□□□ -2.05
MSH4YFL003C RRP17Q04031 235 aaPredicted RBP2.27□□□□□ -2.05
MSH4YFL003C SMT3Q12306 101 aaKnown RBP2.27□□□□□ -2.05
MSH4YFL003C EMP46Q12396 444 aa2.27□□□□□ -2.05
MSH4YFL003C MGT1P26188 188 aa2.27□□□□□ -2.05
MSH4YFL003C TCA17P32613 152 aa2.27□□□□□ -2.05
MSH4YFL003C CLG1P35190 452 aa2.27□□□□□ -2.05
MSH4YFL003C SSH1P38353 490 aaKnown RBP2.27□□□□□ -2.05
MSH4YFL003C LSM7P53905 115 aaKnown RBP2.27□□□□□ -2.05
MSH4YFL003C OSH6Q02201 448 aa2.27□□□□□ -2.05
MSH4YFL003C TVP15Q03860 143 aa2.27□□□□□ -2.05
MSH4YFL003C LSO2Q3E772 92 aaKnown RBP2.27□□□□□ -2.05
MSH4YFL003C FLO11P08640 1367 aa2.27□□□□□ -2.05
MSH4YFL003C FAB1P34756 2278 aa2.26□□□□□ -2.05
MSH4YFL003C YPT52P36018 234 aaKnown RBP2.26□□□□□ -2.05
MSH4YFL003C TEM1P38987 245 aa2.26□□□□□ -2.05
MSH4YFL003C PRM8P53174 237 aa2.26□□□□□ -2.05
MSH4YFL003C YML108WQ03759 105 aa2.26□□□□□ -2.05
MSH4YFL003C YOL024WQ08172 172 aa2.26□□□□□ -2.05
MSH4YFL003C IPP1P00817 287 aaKnown RBP2.26□□□□□ -2.05
MSH4YFL003C PRE7P23724 241 aaKnown RBP2.26□□□□□ -2.05
MSH4YFL003C PDS1P40316 373 aaPredicted RBP2.26□□□□□ -2.05
MSH4YFL003C UFE1P41834 346 aa2.26□□□□□ -2.05
MSH4YFL003C UBC12P52491 188 aa2.26□□□□□ -2.05
MSH4YFL003C CAX4P53223 239 aa2.26□□□□□ -2.05
MSH4YFL003C NUP49Q02199 472 aa2.26□□□□□ -2.05
MSH4YFL003C PEX12Q04370 399 aa2.26□□□□□ -2.05
MSH4YFL003C YDL211CQ12121 372 aa2.26□□□□□ -2.05
MSH4YFL003C YLR050CQ12155 161 aaKnown RBP2.26□□□□□ -2.05
MSH4YFL003C IGO2Q9P305 131 aa2.26□□□□□ -2.05
MSH4YFL003C PMD1P32634 1753 aa2.26□□□□□ -2.05
MSH4YFL003C DOG1P38774 246 aa2.25□□□□□ -2.05
MSH4YFL003C AIM25P47140 327 aa2.25□□□□□ -2.05
MSH4YFL003C YLR036CQ07986 203 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms