RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A SKG1P36169 355 aa1.27□□□□□ -2.21
YDR261W-AYDR261W-A PRE6P40303 254 aaKnown RBP1.27□□□□□ -2.21
YDR261W-AYDR261W-A ERJ5P43613 295 aaPredicted RBP1.27□□□□□ -2.21
YDR261W-AYDR261W-A PRM8P53174 237 aa1.27□□□□□ -2.21
YDR261W-AYDR261W-A FYV6P53913 173 aa1.27□□□□□ -2.21
YDR261W-AYDR261W-A MSN4P33749 630 aa1.26□□□□□ -2.21
YDR261W-AYDR261W-A MRPL17P36528 281 aa1.26□□□□□ -2.21
YDR261W-AYDR261W-A COX15P40086 486 aa1.26□□□□□ -2.21
YDR261W-AYDR261W-A NUP57P48837 541 aa1.26□□□□□ -2.21
YDR261W-AYDR261W-A MPA43P53583 542 aaPredicted RBP1.26□□□□□ -2.21
YDR261W-AYDR261W-A SWP1Q02795 286 aa1.26□□□□□ -2.21
YDR261W-AYDR261W-A RRN5Q02983 363 aa1.26□□□□□ -2.21
YDR261W-AYDR261W-A YLR283WQ05867 314 aa1.26□□□□□ -2.21
YDR261W-AYDR261W-A TSC3Q3E790 80 aa1.26□□□□□ -2.21
YDR261W-AYDR261W-A TDA8Q6B2U8 126 aa1.26□□□□□ -2.21
YDR261W-AYDR261W-A PDR18P53756 1333 aa1.26□□□□□ -2.21
YDR261W-AYDR261W-A VAR1P02381 398 aa1.25□□□□□ -2.21
YDR261W-AYDR261W-A SSO1P32867 290 aa1.25□□□□□ -2.21
YDR261W-AYDR261W-A TVP38P36164 337 aa1.25□□□□□ -2.21
YDR261W-AYDR261W-A LIA1P47120 325 aaKnown RBP1.25□□□□□ -2.21
YDR261W-AYDR261W-A EAF6P47128 113 aa1.25□□□□□ -2.21
YDR261W-AYDR261W-A NOP13P53883 403 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
YDR261W-AYDR261W-A UBC7Q02159 165 aa1.25□□□□□ -2.21
YDR261W-AYDR261W-A GAS3Q03655 524 aa1.25□□□□□ -2.21
YDR261W-AYDR261W-A YDL180WQ12301 547 aa1.25□□□□□ -2.21
YDR261W-AYDR261W-A TIM9O74700 87 aa1.24□□□□□ -2.21
YDR261W-AYDR261W-A CDC28P00546 298 aaKnown RBP1.24□□□□□ -2.21
YDR261W-AYDR261W-A SRY1P36007 326 aa1.24□□□□□ -2.21
YDR261W-AYDR261W-A YBR209WP38311 105 aa1.24□□□□□ -2.21
YDR261W-AYDR261W-A YER076CP40049 302 aa1.24□□□□□ -2.21
YDR261W-AYDR261W-A RPC17P47076 161 aa1.24□□□□□ -2.21
YDR261W-AYDR261W-A CDC123Q05791 360 aa1.23□□□□□ -2.21
YDR261W-AYDR261W-A MSB2P32334 1306 aa1.23□□□□□ -2.21
YDR261W-AYDR261W-A RIO2P40160 425 aaKnown RBP1.22□□□□□ -2.21
YDR261W-AYDR261W-A GVP36P40531 326 aaKnown RBP1.22□□□□□ -2.21
YDR261W-AYDR261W-A FAR7P43592 221 aa1.22□□□□□ -2.21
YDR261W-AYDR261W-A BXI1P48558 297 aa1.22□□□□□ -2.21
YDR261W-AYDR261W-A BRR6P53062 197 aa1.22□□□□□ -2.21
YDR261W-AYDR261W-A ALG13P53178 202 aa1.22□□□□□ -2.21
YDR261W-AYDR261W-A CUS2P53830 285 aaPredicted RBP1.22□□□□□ -2.21
YDR261W-AYDR261W-A FSF1Q12029 327 aaKnown RBP1.22□□□□□ -2.21
YDR261W-AYDR261W-A RHO1P06780 209 aaKnown RBP1.21□□□□□ -2.22
YDR261W-AYDR261W-A DBF2P22204 572 aa1.21□□□□□ -2.22
YDR261W-AYDR261W-A MIC26P50087 233 aa1.21□□□□□ -2.22
YDR261W-AYDR261W-A POP3P53833 195 aaPredicted RBP1.21□□□□□ -2.22
YDR261W-AYDR261W-A GPM2Q12008 311 aa1.21□□□□□ -2.22
YDR261W-AYDR261W-A KNH1P50112 268 aa1.2□□□□□ -2.22
YDR261W-AYDR261W-A YNL146C-AQ3E7Z1 64 aa1.2□□□□□ -2.22
YDR261W-AYDR261W-A ATG40Q99325 256 aa1.2□□□□□ -2.22
YDR261W-AYDR261W-A APS1P35181 156 aa1.19□□□□□ -2.22
YDR261W-AYDR261W-A MIC12P38341 106 aa1.19□□□□□ -2.22
YDR261W-AYDR261W-A MCP1Q12106 302 aa1.19□□□□□ -2.22
YDR261W-AYDR261W-A YIL177CP40434 1758 aa1.19□□□□□ -2.22
YDR261W-AYDR261W-A YJL225CP40889 1758 aa1.19□□□□□ -2.22
YDR261W-AYDR261W-A RPL28P02406 149 aaKnown RBP1.18□□□□□ -2.22
YDR261W-AYDR261W-A RPL24BP24000 155 aaKnown RBP1.18□□□□□ -2.22
YDR261W-AYDR261W-A VMA6P32366 345 aaKnown RBP1.18□□□□□ -2.22
YDR261W-AYDR261W-A RMD6P39975 231 aa1.18□□□□□ -2.22
YDR261W-AYDR261W-A YMR31P19955 123 aa1.17□□□□□ -2.22
YDR261W-AYDR261W-A SEC17P32602 292 aa1.17□□□□□ -2.22
YDR261W-AYDR261W-A UTP30P36144 274 aaKnown RBP1.17□□□□□ -2.22
YDR261W-AYDR261W-A YBR285WP38354 144 aa1.17□□□□□ -2.22
YDR261W-AYDR261W-A AST2P39945 430 aaKnown RBP1.17□□□□□ -2.22
YDR261W-AYDR261W-A RPL37AP49166 88 aaKnown RBP1.17□□□□□ -2.22
YDR261W-AYDR261W-A YLR236CA0A023PZG4 107 aa1.16□□□□□ -2.22
YDR261W-AYDR261W-A THP2O13539 261 aaKnown RBP1.16□□□□□ -2.22
YDR261W-AYDR261W-A SHE2P36068 246 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
YDR261W-AYDR261W-A YER085CP40058 173 aa1.16□□□□□ -2.22
YDR261W-AYDR261W-A ACC1Q00955 2233 aaKnown RBP1.16□□□□□ -2.22
YDR261W-AYDR261W-A URA5P13298 226 aaKnown RBP1.15□□□□□ -2.22
YDR261W-AYDR261W-A BET1P22804 142 aa1.15□□□□□ -2.22
YDR261W-AYDR261W-A PPA2P28239 310 aa1.15□□□□□ -2.22
YDR261W-AYDR261W-A TCA17P32613 152 aa1.15□□□□□ -2.22
YDR261W-AYDR261W-A PTM1P32857 523 aa1.15□□□□□ -2.22
YDR261W-AYDR261W-A OPY1P38271 328 aa1.15□□□□□ -2.22
YDR261W-AYDR261W-A CUE4Q04201 117 aaPredicted RBP1.15□□□□□ -2.22
YDR261W-AYDR261W-A SIR2P06700 562 aa1.15□□□□□ -2.23
YDR261W-AYDR261W-A KSS1P14681 368 aa1.15□□□□□ -2.23
YDR261W-AYDR261W-A IDH1P28834 360 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
YDR261W-AYDR261W-A RTC3P38804 111 aaPredicted RBP1.15□□□□□ -2.23
YDR261W-AYDR261W-A YDR274CP87283 123 aa1.15□□□□□ -2.23
YDR261W-AYDR261W-A RAD28Q12021 506 aa1.15□□□□□ -2.23
YDR261W-AYDR261W-A YHR214C-EQ8TGK0 99 aa1.15□□□□□ -2.23
YDR261W-AYDR261W-A YEL067CP39978 195 aa1.14□□□□□ -2.23
YDR261W-AYDR261W-A RCE1Q03530 315 aa1.14□□□□□ -2.23
YDR261W-AYDR261W-A YMR007WQ03675 126 aa1.14□□□□□ -2.23
YDR261W-AYDR261W-A YHR007C-AQ07074 71 aa1.14□□□□□ -2.23
YDR261W-AYDR261W-A SEC11P15367 167 aa1.13□□□□□ -2.23
YDR261W-AYDR261W-A SIP3P38717 1229 aa1.13□□□□□ -2.23
YDR261W-AYDR261W-A GCN3P14741 305 aa1.12□□□□□ -2.23
YDR261W-AYDR261W-A PBN1P25580 416 aa1.12□□□□□ -2.23
YDR261W-AYDR261W-A EDC3P39998 551 aaKnown RBP1.12□□□□□ -2.23
YDR261W-AYDR261W-A SOK1P40317 901 aa1.12□□□□□ -2.23
YDR261W-AYDR261W-A ARO8P53090 500 aaKnown RBP1.12□□□□□ -2.23
YDR261W-AYDR261W-A YDR249CQ03787 373 aa1.12□□□□□ -2.23
YDR261W-AYDR261W-A YFR032C-BQ8TGU2 87 aa1.12□□□□□ -2.23
YDR261W-AYDR261W-A YBR121C-AP0C5L4 52 aa1.11□□□□□ -2.23
YDR261W-AYDR261W-A NSP1P14907 823 aaKnown RBP1.11□□□□□ -2.23
YDR261W-AYDR261W-A YGR050CP53231 118 aa1.11□□□□□ -2.23
YDR261W-AYDR261W-A PET191Q02772 108 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms