RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB1	YDL229W	YDR344C	Q05510	147 aa		3.87	□□□□□ -1.79
SSB1	YDL229W	TDA6	Q06466	467 aa		3.87	□□□□□ -1.79
SSB1	YDL229W	ANT1	Q06497	328 aa		3.87	□□□□□ -1.79
SSB1	YDL229W	YFH1	Q07540	174 aa		3.87	□□□□□ -1.79
SSB1	YDL229W	SOR2	Q07786	357 aa		3.87	□□□□□ -1.79
SSB1	YDL229W	PAU23	Q07987	124 aa		3.87	□□□□□ -1.79
SSB1	YDL229W	PAU17	Q12370	124 aa		3.87	□□□□□ -1.79
SSB1	YDL229W	UBA3	Q99344	299 aa		3.87	□□□□□ -1.79
SSB1	YDL229W	SLH1	P53327	1967 aa	Known RBP	3.87	□□□□□ -1.79
SSB1	YDL229W	HMRA1	P0CY11	126 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	INO2	P26798	304 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	MRP20	P32387	263 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	KTR3	P38130	404 aa	Predicted RBP	3.86	□□□□□ -1.79
SSB1	YDL229W	YBR090C	P38253	122 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	YFL065C	P43539	102 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	GCV1	P48015	400 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	CDH1	P53197	566 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	IBD2	P53892	351 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	RPL22B	P56628	122 aa	Known RBP	3.86	□□□□□ -1.79
SSB1	YDL229W	TVP15	Q03860	143 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	PRM6	Q04705	352 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	HRI1	Q05905	244 aa	Known RBP	3.86	□□□□□ -1.79
SSB1	YDL229W	YOL159C	Q08300	171 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	YPR203W	Q08994	102 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	YPR027C	Q12079	277 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	MCP1	Q12106	302 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	SUS1	Q6WNK7	96 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	UBI4	P0CG63	381 aa	Known RBP	3.86	□□□□□ -1.79
SSB1	YDL229W	RPL12A	P0CX53	165 aa	Known RBP	3.86	□□□□□ -1.79
SSB1	YDL229W	RPL12B	P0CX54	165 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	CDC26	P14724	124 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	GLN3	P18494	730 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	SDH2	P21801	266 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	HYP2	P23301	157 aa	Known RBP	3.86	□□□□□ -1.79
SSB1	YDL229W	SFC1	P33303	322 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	AHP1	P38013	176 aa	Known RBP	3.86	□□□□□ -1.79
SSB1	YDL229W	ELO1	P39540	310 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	SPC25	P40014	221 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	YJL218W	P40892	196 aa	Known RBP	3.86	□□□□□ -1.79
SSB1	YDL229W	YKR011C	Q02209	353 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	YML053C	Q04978	212 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	ERP1	Q05359	219 aa	Known RBP	3.86	□□□□□ -1.79
SSB1	YDL229W	FCF1	Q05498	189 aa	Predicted RBP	3.86	□□□□□ -1.79
SSB1	YDL229W	GRX8	Q05926	109 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	PRM3	Q08931	133 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	YLR050C	Q12155	161 aa	Known RBP	3.86	□□□□□ -1.79
SSB1	YDL229W	YDR215C	Q12240	137 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	YLR118C	Q12354	227 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	PRP46	Q12417	451 aa	Predicted RBP	3.86	□□□□□ -1.79
SSB1	YDL229W	MHF1	Q3E835	90 aa		3.86	□□□□□ -1.79
SSB1	YDL229W	RAS1	P01119	309 aa		3.85	□□□□□ -1.79
SSB1	YDL229W	HIP1	P06775	603 aa		3.85	□□□□□ -1.79
SSB1	YDL229W	SEC4	P07560	215 aa	Known RBP	3.85	□□□□□ -1.79
SSB1	YDL229W	BET2	P20133	325 aa		3.85	□□□□□ -1.79
SSB1	YDL229W	BUB2	P26448	306 aa	Predicted RBP	3.85	□□□□□ -1.79
SSB1	YDL229W	URA10	P30402	227 aa		3.85	□□□□□ -1.79
SSB1	YDL229W	YKL187C	P34231	750 aa		3.85	□□□□□ -1.79
SSB1	YDL229W	TFA2	P36145	328 aa		3.85	□□□□□ -1.79
SSB1	YDL229W	YBR241C	P38142	488 aa		3.85	□□□□□ -1.79
SSB1	YDL229W	XBP1	P40489	647 aa		3.85	□□□□□ -1.79
SSB1	YDL229W	LCB3	P47013	409 aa		3.85	□□□□□ -1.79
SSB1	YDL229W	YGR283C	P53336	341 aa	Predicted RBP	3.85	□□□□□ -1.79
SSB1	YDL229W	WSC2	P53832	503 aa		3.85	□□□□□ -1.79
SSB1	YDL229W	YIF1	P53845	314 aa	Known RBP	3.85	□□□□□ -1.79
SSB1	YDL229W	SPR6	Q01684	191 aa		3.85	□□□□□ -1.79
SSB1	YDL229W	RSM10	Q03201	203 aa		3.85	□□□□□ -1.79
SSB1	YDL229W	HPF1	Q05164	967 aa		3.85	□□□□□ -1.79
SSB1	YDL229W	YPR174C	Q06616	221 aa	Predicted RBP	3.85	□□□□□ -1.79
SSB1	YDL229W	NUS1	Q12063	375 aa		3.85	□□□□□ -1.79
SSB1	YDL229W	ADH1	P00330	348 aa	Known RBP	3.84	□□□□□ -1.79
SSB1	YDL229W	COX1	P00401	534 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	UBC5	P15732	148 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	KAR4	P25583	335 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	TAH1	P25638	111 aa	Predicted RBP	3.84	□□□□□ -1.79
SSB1	YDL229W	MGT1	P26188	188 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	MLF3	P32047	452 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	YPS1	P32329	569 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.84	□□□□□ -1.79	not detected
SSB1	YDL229W	NNK1	P36003	928 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	POP8	P38208	133 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	GCV3	P39726	170 aa	Predicted RBP	3.84	□□□□□ -1.79
SSB1	YDL229W	YPS6	P40583	537 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	CAT5	P41735	233 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	AVT1	P47082	602 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	XPT1	P47165	209 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	YGR149W	P48236	432 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	CTR1	P49573	406 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	CDC14	Q00684	551 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	SWC7	Q06707	132 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	PLB3	Q08108	686 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	YOL073C	Q08232	322 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	ORT1	Q12375	292 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	SWM1	Q12379	170 aa		3.84	□□□□□ -1.79
SSB1	YDL229W	COX10	P21592	462 aa		3.84	□□□□□ -1.8
SSB1	YDL229W	YSC83	P32792	385 aa		3.84	□□□□□ -1.8
SSB1	YDL229W	SDH3	P33421	198 aa		3.84	□□□□□ -1.8
SSB1	YDL229W	SHB17	P36136	271 aa	Known RBP	3.84	□□□□□ -1.8
SSB1	YDL229W	PET10	P36139	283 aa		3.84	□□□□□ -1.8
SSB1	YDL229W	MRPS9	P38120	278 aa		3.84	□□□□□ -1.8
SSB1	YDL229W	RIM2	P38127	377 aa		3.84	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 475.1 ms