RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	GEX1	P25596	615 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	SLC1	P33333	303 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	MTR2	P34232	184 aa	Known RBP	3.55	□□□□□ -1.84
VMA1	YDL185W	PMU1	P36069	295 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	AUR1	P36107	401 aa	Predicted RBP	3.55	□□□□□ -1.84
VMA1	YDL185W	GEX2	P36173	615 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	RPF1	P38805	295 aa	Known RBP	3.55	□□□□□ -1.84
VMA1	YDL185W	APQ12	P40532	138 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	YJR115W	P47152	169 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	FLC3	P53121	802 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	YGR017W	P53210	297 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	LST7	P53237	242 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	TMN2	Q04562	672 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	ATG39	Q06159	398 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	YPR064W	Q12492	139 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	DET1	Q99288	334 aa	Known RBP	3.55	□□□□□ -1.84
VMA1	YDL185W	MCK1	P21965	375 aa	Known RBP	3.55	□□□□□ -1.84
VMA1	YDL185W	ARO4	P32449	370 aa	Known RBP	3.55	□□□□□ -1.84
VMA1	YDL185W	YKL187C	P34231	750 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	HMT1	P38074	348 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	YMR206W	Q03695	313 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	YDL242W	Q07746	117 aa		3.55	□□□□□ -1.84
VMA1	YDL185W	YMR084W	A2P2R3	262 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	PAU1	P0CE88	120 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	PAU14	P0CE89	120 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	PAU6	P0CE90	120 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	PAU18	P0CE91	120 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	PAU8	P0CE92	120 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	PAU11	P0CE93	120 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	OLE1	P21147	510 aa	Known RBP	3.54	□□□□□ -1.84
VMA1	YDL185W	ARO2	P28777	376 aa	Known RBP	3.54	□□□□□ -1.84
VMA1	YDL185W	AME1	P38313	324 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	PAU13	P38725	120 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	YJL028W	P47062	111 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	HHT1	P61830	136 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	PAU10	Q03050	120 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	CTS2	Q06350	511 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	PAU20	Q08322	120 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	VAM3	Q12241	283 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	MCT1	Q12283	360 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	PAU9	Q3E770	120 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	NOP1	P15646	327 aa	Known RBP	3.54	□□□□□ -1.84
VMA1	YDL185W	ADK2	P26364	225 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	PRE2	P30656	287 aa	Known RBP	3.54	□□□□□ -1.84
VMA1	YDL185W	PAU16	P35994	123 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	YBR220C	P38318	560 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	YEL057C	P39983	233 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	TTI2	P47168	421 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	SGF73	P53165	657 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	TNA1	P53322	534 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	IZH1	Q03419	316 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	THI74	Q04083	370 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	SNO4	Q04902	237 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	YPR114W	Q06107	315 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	HSP32	Q08992	237 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	PRR2	Q12310	699 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	SRF1	Q12516	437 aa		3.54	□□□□□ -1.84
VMA1	YDL185W	CYC7	P00045	113 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	RPP2A	P05319	106 aa	Known RBP	3.53	□□□□□ -1.84
VMA1	YDL185W	MIX23	P38162	196 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	GPP1	P41277	250 aa	Known RBP	3.53	□□□□□ -1.84
VMA1	YDL185W	SMD3	P43321	101 aa	Known RBP	3.53	□□□□□ -1.84
VMA1	YDL185W	MIC26	P50087	233 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	SCW4	P53334	386 aa	Known RBP	3.53	□□□□□ -1.84
VMA1	YDL185W	SLO1	Q3E784	85 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	YLR358C	O13565	187 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	AHT1	P29589	182 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
VMA1	YDL185W	YPT53	P36019	220 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	PIC2	P40035	300 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	YER134C	P40081	178 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	HSV2	P50079	448 aa	Predicted RBP	3.53	□□□□□ -1.84
VMA1	YDL185W	RTN1	Q04947	295 aa	Known RBP	3.53	□□□□□ -1.84
VMA1	YDL185W	HRD1	Q08109	551 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	LEU9	Q12166	604 aa	Known RBP	3.53	□□□□□ -1.84
VMA1	YDL185W	SME1	Q12330	94 aa	Predicted RBP	3.53	□□□□□ -1.84
VMA1	YDL185W	STE7	P06784	515 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	CPA1	P07258	411 aa	Known RBP	3.53	□□□□□ -1.84
VMA1	YDL185W	MSN1	P22148	382 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	SCO1	P23833	295 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	MGM101	P32787	269 aa	Known RBP	3.53	□□□□□ -1.84
VMA1	YDL185W	YBR184W	P38299	523 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	DOG1	P38774	246 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	PAC2	P39937	518 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	RPL13B	P40212	199 aa	Known RBP	3.53	□□□□□ -1.84
VMA1	YDL185W	XBP1	P40489	647 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	YIL067C	P40514	678 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	YGR126W	P53274	230 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	DIA1	P54005	336 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	YPR147C	Q06522	304 aa	Known RBP	3.53	□□□□□ -1.84
VMA1	YDL185W	LEA1	Q08963	238 aa	Predicted RBP	3.53	□□□□□ -1.84
VMA1	YDL185W	HUT1	Q12520	339 aa		3.53	□□□□□ -1.84
VMA1	YDL185W	RPL13A	Q12690	199 aa	Predicted RBP	3.53	□□□□□ -1.84
VMA1	YDL185W	YFL068W	P0CX99	160 aa		3.52	□□□□□ -1.85
VMA1	YDL185W	YLL066W-A	P0CY00	160 aa		3.52	□□□□□ -1.85
VMA1	YDL185W	YLL067W-A	P0CY01	160 aa		3.52	□□□□□ -1.85
VMA1	YDL185W	NUP1	P20676	1076 aa		3.52	□□□□□ -1.85
VMA1	YDL185W	MAK32	P23060	363 aa		3.52	□□□□□ -1.85
VMA1	YDL185W	CPR2	P23285	205 aa		3.52	□□□□□ -1.85
VMA1	YDL185W	MLF3	P32047	452 aa		3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms