RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	PTM1	P32857	523 aa		3.67	□□□□□ -1.82
RPN5	YDL147W	YER034W	P40022	185 aa	Known RBP	3.67	□□□□□ -1.82
RPN5	YDL147W	AIM25	P47140	327 aa		3.67	□□□□□ -1.82
RPN5	YDL147W	RPL26B	P53221	127 aa	Known RBP	3.67	□□□□□ -1.82
RPN5	YDL147W	RDS3	Q06835	107 aa	Predicted RBP	3.67	□□□□□ -1.82
RPN5	YDL147W	YET3	Q07451	203 aa		3.67	□□□□□ -1.82
RPN5	YDL147W	MHT1	Q12525	324 aa		3.67	□□□□□ -1.82
RPN5	YDL147W	YHR214C-E	Q8TGK0	99 aa		3.67	□□□□□ -1.82
RPN5	YDL147W	PUT1	P09368	476 aa		3.66	□□□□□ -1.82
RPN5	YDL147W	DSK2	P48510	373 aa		3.66	□□□□□ -1.82
RPN5	YDL147W	SUE1	Q06524	206 aa		3.66	□□□□□ -1.82
RPN5	YDL147W	CDC8	P00572	216 aa		3.65	□□□□□ -1.83
RPN5	YDL147W	SHG1	P38337	142 aa		3.65	□□□□□ -1.83
RPN5	YDL147W	YGR050C	P53231	118 aa		3.65	□□□□□ -1.83
RPN5	YDL147W	CAB4	P53332	305 aa		3.65	□□□□□ -1.83
RPN5	YDL147W	YOL160W	Q08321	113 aa		3.65	□□□□□ -1.83
RPN5	YDL147W	PSF1	Q12488	208 aa		3.65	□□□□□ -1.83
RPN5	YDL147W	MSW1	P04803	379 aa		3.64	□□□□□ -1.83
RPN5	YDL147W	YLR156W	P0CE96	114 aa		3.64	□□□□□ -1.83
RPN5	YDL147W	YLR159W	P0CE97	114 aa		3.64	□□□□□ -1.83
RPN5	YDL147W	YLR161W	P0CE98	114 aa		3.64	□□□□□ -1.83
RPN5	YDL147W	MAG1	P22134	296 aa	Known RBP	3.64	□□□□□ -1.83
RPN5	YDL147W	HMF1	P40037	129 aa	Known RBP	3.64	□□□□□ -1.83
RPN5	YDL147W	SNX4	P47057	423 aa		3.64	□□□□□ -1.83
RPN5	YDL147W	RTC4	P53850	401 aa		3.64	□□□□□ -1.83
RPN5	YDL147W	MRS1	P07266	363 aa		3.63	□□□□□ -1.83
RPN5	YDL147W	KSS1	P14681	368 aa		3.63	□□□□□ -1.83
RPN5	YDL147W	MRPL49	P40858	161 aa	Predicted RBP	3.63	□□□□□ -1.83
RPN5	YDL147W	COG5	P53951	403 aa		3.63	□□□□□ -1.83
RPN5	YDL147W	SLM2	P53955	656 aa		3.63	□□□□□ -1.83
RPN5	YDL147W	YPL162C	Q12042	273 aa		3.63	□□□□□ -1.83
RPN5	YDL147W	SMD3	P43321	101 aa	Known RBP	3.62	□□□□□ -1.83
RPN5	YDL147W	PRM15	Q03262	622 aa		3.62	□□□□□ -1.83
RPN5	YDL147W	IGO2	Q9P305	131 aa		3.62	□□□□□ -1.83
RPN5	YDL147W	REP2	P03872	296 aa		3.61	□□□□□ -1.83
RPN5	YDL147W	CTR2	P38865	189 aa		3.61	□□□□□ -1.83
RPN5	YDL147W	PDS1	P40316	373 aa	Predicted RBP	3.61	□□□□□ -1.83
RPN5	YDL147W	MNN5	P46982	586 aa		3.61	□□□□□ -1.83
RPN5	YDL147W	SIR2	P06700	562 aa		3.6	□□□□□ -1.83
RPN5	YDL147W	GRX2	P17695	143 aa	Known RBP	3.6	□□□□□ -1.83
RPN5	YDL147W	SNF6	P18888	332 aa		3.6	□□□□□ -1.83
RPN5	YDL147W	BET1	P22804	142 aa		3.6	□□□□□ -1.83
RPN5	YDL147W	CLB6	P32943	380 aa		3.6	□□□□□ -1.83
RPN5	YDL147W	VPS51	P36116	164 aa		3.6	□□□□□ -1.83
RPN5	YDL147W	POG1	P40473	351 aa		3.6	□□□□□ -1.83
RPN5	YDL147W	YJR146W	P47174	117 aa		3.6	□□□□□ -1.83
RPN5	YDL147W	APJ1	P53940	528 aa		3.6	□□□□□ -1.83
RPN5	YDL147W	FUS2	Q05670	677 aa		3.6	□□□□□ -1.83
RPN5	YDL147W	NOC4	Q06512	552 aa	Predicted RBP	3.6	□□□□□ -1.83
RPN5	YDL147W	YLR036C	Q07986	203 aa		3.6	□□□□□ -1.83
RPN5	YDL147W	HRT1	Q08273	121 aa		3.6	□□□□□ -1.83
RPN5	YDL147W	IKI3	Q06706	1349 aa	Known RBP	3.59	□□□□□ -1.83
RPN5	YDL147W	FBA1	P14540	359 aa	Known RBP	3.59	□□□□□ -1.83
RPN5	YDL147W	TAH1	P25638	111 aa	Predicted RBP	3.59	□□□□□ -1.83
RPN5	YDL147W	UTP30	P36144	274 aa	Known RBP	3.59	□□□□□ -1.83
RPN5	YDL147W	COS6	P53344	381 aa		3.59	□□□□□ -1.83
RPN5	YDL147W	GIM5	Q04493	163 aa		3.59	□□□□□ -1.83
RPN5	YDL147W	USB1	Q12208	290 aa	Known RBP	3.59	□□□□□ -1.83
RPN5	YDL147W	ATO3	Q12359	275 aa		3.59	□□□□□ -1.83
RPN5	YDL147W	CMC2	Q3E7A4	109 aa		3.59	□□□□□ -1.83
RPN5	YDL147W	YFR032C-B	Q8TGU2	87 aa		3.59	□□□□□ -1.83
RPN5	YDL147W	URA5	P13298	226 aa	Known RBP	3.58	□□□□□ -1.84
RPN5	YDL147W	TRX3	P25372	127 aa		3.58	□□□□□ -1.84
RPN5	YDL147W	SEC17	P32602	292 aa		3.58	□□□□□ -1.84
RPN5	YDL147W	GLE2	P40066	365 aa		3.58	□□□□□ -1.84
RPN5	YDL147W	YGR219W	P53307	113 aa		3.58	□□□□□ -1.84
RPN5	YDL147W	MIX17	Q03667	156 aa		3.58	□□□□□ -1.84
RPN5	YDL147W	TRM12	Q04235	462 aa		3.58	□□□□□ -1.84
RPN5	YDL147W	ARR2	Q06597	130 aa		3.58	□□□□□ -1.84
RPN5	YDL147W	YOL024W	Q08172	172 aa		3.58	□□□□□ -1.84
RPN5	YDL147W	CKS1	P20486	150 aa	Known RBP	3.57	□□□□□ -1.84
RPN5	YDL147W	MRPS28	P21771	286 aa		3.57	□□□□□ -1.84
RPN5	YDL147W	SCO1	P23833	295 aa		3.57	□□□□□ -1.84
RPN5	YDL147W	UTR5	P32630	166 aa		3.57	□□□□□ -1.84
RPN5	YDL147W	ERG10	P41338	398 aa	Known RBP	3.57	□□□□□ -1.84
RPN5	YDL147W	AIF1	P52923	378 aa		3.57	□□□□□ -1.84
RPN5	YDL147W	SWP1	Q02795	286 aa		3.57	□□□□□ -1.84
RPN5	YDL147W	SNO1	Q03144	224 aa		3.57	□□□□□ -1.84
RPN5	YDL147W	NEJ1	Q06148	342 aa		3.57	□□□□□ -1.84
RPN5	YDL147W	GRE1	Q08969	168 aa		3.57	□□□□□ -1.84
RPN5	YDL147W	VPS68	Q12016	184 aa		3.57	□□□□□ -1.84
RPN5	YDL147W	MCP1	Q12106	302 aa		3.57	□□□□□ -1.84
RPN5	YDL147W	TSC3	Q3E790	80 aa		3.57	□□□□□ -1.84
RPN5	YDL147W	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.57	□□□□□ -1.84
RPN5	YDL147W	MED6	P38782	295 aa		3.56	□□□□□ -1.84
RPN5	YDL147W	NRK1	P53915	240 aa		3.56	□□□□□ -1.84
RPN5	YDL147W	YDR249C	Q03787	373 aa		3.56	□□□□□ -1.84
RPN5	YDL147W	ARO80	Q04052	950 aa		3.56	□□□□□ -1.84
RPN5	YDL147W	GGA1	Q06336	557 aa		3.56	□□□□□ -1.84
RPN5	YDL147W	RPB3	P16370	318 aa	Known RBP	3.55	□□□□□ -1.84
RPN5	YDL147W	ECM4	P36156	370 aa		3.55	□□□□□ -1.84
RPN5	YDL147W	SRP14	P38985	146 aa		3.55	□□□□□ -1.84
RPN5	YDL147W	CIS3	P47001	227 aa		3.55	□□□□□ -1.84
RPN5	YDL147W	GRX8	Q05926	109 aa		3.55	□□□□□ -1.84
RPN5	YDL147W	RIO1	Q12196	484 aa	Known RBP	3.55	□□□□□ -1.84
RPN5	YDL147W	MBF1	O14467	151 aa	Known RBP	3.54	□□□□□ -1.84
RPN5	YDL147W	SNF4	P12904	322 aa		3.54	□□□□□ -1.84
RPN5	YDL147W	RAD51	P25454	400 aa		3.54	□□□□□ -1.84
RPN5	YDL147W	TRR1	P29509	319 aa	Known RBP	3.54	□□□□□ -1.84
RPN5	YDL147W	YNL184C	P53876	108 aa		3.54	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms