RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 ZNF571Q7Z3V5 609 aaPredicted RBP15.45■□□□□ 0.06
ZNF548-212ENST00000602086 UBE2Q1Q7Z7E8 422 aa15.45■□□□□ 0.06
ZNF548-212ENST00000602086 UBR7Q8N806 425 aa15.45■□□□□ 0.06
ZNF548-212ENST00000602086 SMG8Q8ND04 991 aaKnown RBP15.45■□□□□ 0.06
ZNF548-212ENST00000602086 TOX2Q96NM4 488 aa15.45■□□□□ 0.06
ZNF548-212ENST00000602086 DESI2Q9BSY9 194 aa15.45■□□□□ 0.06
ZNF548-212ENST00000602086 NIF3L1Q9GZT8 377 aa15.45■□□□□ 0.06
ZNF548-212ENST00000602086 NXF3Q9H4D5 531 aaKnown RBP15.45■□□□□ 0.06
ZNF548-212ENST00000602086 AGO3Q9H9G7 860 aaKnown RBP15.45■□□□□ 0.06
ZNF548-212ENST00000602086 FAM105AQ9NUU6 356 aa15.45■□□□□ 0.06
ZNF548-212ENST00000602086 TRMT1Q9NXH9 659 aaKnown RBP15.45■□□□□ 0.06
ZNF548-212ENST00000602086 SIX4Q9UIU6 781 aa15.45■□□□□ 0.06
ZNF548-212ENST00000602086 UBQLN1Q9UMX0 589 aaKnown RBP15.45■□□□□ 0.06
ZNF548-212ENST00000602086 NENFQ9UMX5 172 aa15.45■□□□□ 0.06
ZNF548-212ENST00000602086 TLR3O15455 904 aaKnown RBP15.44■□□□□ 0.06
ZNF548-212ENST00000602086 PJA2O43164 708 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 OFD1O75665 1012 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 PARNO95453 639 aaKnown RBP15.44■□□□□ 0.06
ZNF548-212ENST00000602086 SELPP16109 830 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 ACO1P21399 889 aaKnown RBP15.44■□□□□ 0.06
ZNF548-212ENST00000602086 VAV2P52735 878 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 MYL6P60660 151 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 NFX1Q12986 1120 aaKnown RBP15.44■□□□□ 0.06
ZNF548-212ENST00000602086 PTPN14Q15678 1187 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 ZNF677Q86XU0 584 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 TTC39CQ8N584 583 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 LRRC52Q8N7C0 313 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 ACRBPQ8NEB7 543 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 BEST2Q8NFU1 509 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 SLC30A5Q8TAD4 765 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 KAT5Q92993 513 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 KIF12Q96FN5 646 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 PI4K2AQ9BTU6 479 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 HTATIP2Q9BUP3 242 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 TSGA10Q9BZW7 698 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 UBN1Q9NPG3 1134 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 DPP3Q9NY33 737 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 MYO1AQ9UBC5 1043 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 INTUQ9ULD6 942 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 GIT1Q9Y2X7 761 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 NUB1Q9Y5A7 615 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 PCDHB2Q9Y5E7 798 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 SZT2Q5T011 3432 aa15.44■□□□□ 0.06
ZNF548-212ENST00000602086 A0A0U1RQF3 1178 aa15.43■□□□□ 0.06
ZNF548-212ENST00000602086 ZNF263O14978 683 aa15.43■□□□□ 0.06
ZNF548-212ENST00000602086 COL6A1P12109 1028 aa15.43■□□□□ 0.06
ZNF548-212ENST00000602086 P4HA1P13674 534 aa15.43■□□□□ 0.06
ZNF548-212ENST00000602086 CD52P31358 61 aa15.43■□□□□ 0.06
ZNF548-212ENST00000602086 MNX1P50219 401 aaPredicted RBP15.43■□□□□ 0.06
ZNF548-212ENST00000602086 ARID5AQ03989 594 aa15.43■□□□□ 0.06
ZNF548-212ENST00000602086 ZNF699Q32M78 642 aa15.43■□□□□ 0.06
ZNF548-212ENST00000602086 FTHL17Q9BXU8 183 aa15.43■□□□□ 0.06
ZNF548-212ENST00000602086 BCO2Q9BYV7 579 aa15.43■□□□□ 0.06
ZNF548-212ENST00000602086 CYP3A43Q9HB55 503 aa15.43■□□□□ 0.06
ZNF548-212ENST00000602086 R3HCC1Q9Y3T6 440 aaKnown RBP15.43■□□□□ 0.06
ZNF548-212ENST00000602086 PCDHA13Q9Y5I0 950 aa15.43■□□□□ 0.06
ZNF548-212ENST00000602086 A0A087X0T9 212 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 SMIM28A0A1B0GU29 152 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 BTNL10A8MVZ5 291 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 INPPL1O15357 1258 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 KRT86O43790 486 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 ITGB3P05106 788 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 FAM228BP0C875 321 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 GHRP10912 638 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 ITGA4P13612 1032 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 MAGEA1P43355 309 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 ETF1P62495 437 aaKnown RBP15.42■□□□□ 0.06
ZNF548-212ENST00000602086 NAB2Q15742 525 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 ZNF667Q5HYK9 610 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 SLC39A5Q6ZMH5 540 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 LRRC8DQ7L1W4 858 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 OLIG1Q8TAK6 271 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 EPS8L1Q8TE68 723 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 PGBD4Q96DM1 585 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 FAM84AQ96KN4 292 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 ZMAT2Q96NC0 199 aaKnown RBP15.42■□□□□ 0.06
ZNF548-212ENST00000602086 AGPAT1Q99943 283 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 IFIH1Q9BYX4 1025 aaKnown RBP15.42■□□□□ 0.06
ZNF548-212ENST00000602086 SLC38A7Q9NVC3 462 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 ADAMTS1Q9UHI8 967 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 NAGPAQ9UK23 515 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 NOCTQ9UK39 431 aaKnown RBP15.42■□□□□ 0.06
ZNF548-212ENST00000602086 HES2Q9Y543 173 aa15.42■□□□□ 0.06
ZNF548-212ENST00000602086 ANO9A1A5B4 782 aa15.41■□□□□ 0.06
ZNF548-212ENST00000602086 TULP1O00294 542 aaPredicted RBP15.41■□□□□ 0.06
ZNF548-212ENST00000602086 SOX1O00570 391 aaPredicted RBP15.41■□□□□ 0.06
ZNF548-212ENST00000602086 DDX3XO00571 662 aaKnown RBP eCLIP15.41■□□□□ 0.06
ZNF548-212ENST00000602086 TFRCP02786 760 aaKnown RBP15.41■□□□□ 0.06
ZNF548-212ENST00000602086 PNMA6AP0CW24 399 aaPredicted RBP15.41■□□□□ 0.06
ZNF548-212ENST00000602086 GZMAP12544 262 aa15.41■□□□□ 0.06
ZNF548-212ENST00000602086 LRPAP1P30533 357 aa15.41■□□□□ 0.06
ZNF548-212ENST00000602086 PNPLA4P41247 253 aa15.41■□□□□ 0.06
ZNF548-212ENST00000602086 ARHGAP25P42331 645 aa15.41■□□□□ 0.06
ZNF548-212ENST00000602086 ZNF132P52740 706 aa15.41■□□□□ 0.06
ZNF548-212ENST00000602086 GFPT1Q06210 699 aaPredicted RBP15.41■□□□□ 0.06
ZNF548-212ENST00000602086 KIF5AQ12840 1032 aa15.41■□□□□ 0.06
ZNF548-212ENST00000602086 MYO1EQ12965 1108 aa15.41■□□□□ 0.06
ZNF548-212ENST00000602086 ARHGAP29Q52LW3 1261 aa15.41■□□□□ 0.06
ZNF548-212ENST00000602086 SPOPLQ6IQ16 392 aa15.41■□□□□ 0.06
ZNF548-212ENST00000602086 KIAA1328Q86T90 577 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms