RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 CCDC149Q6ZUS6 474 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 BEST2Q8NFU1 509 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 SAAL1Q96ER3 474 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 TSPAN18Q96SJ8 248 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 FAM213AQ9BRX8 229 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 PRKD2Q9BZL6 878 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 PCIF1Q9H4Z3 704 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 PIDD1Q9HB75 910 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 ZDHHC7Q9NXF8 308 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 LIMD1Q9UGP4 676 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 TIMM13Q9Y5L4 95 aaPredicted RBP16.02■□□□□ 0.16
USE1-205ENST00000594724 PDCD11Q14690 1871 aaKnown RBP16.01■□□□□ 0.15
USE1-205ENST00000594724 A0A1B0GVL5 298 aa16.01■□□□□ 0.15
USE1-205ENST00000594724 GOLGA8IPA6NC78 632 aa16.01■□□□□ 0.15
USE1-205ENST00000594724 GOLGA8JA6NMD2 632 aa16.01■□□□□ 0.15
USE1-205ENST00000594724 TBC1D4O60343 1298 aa16.01■□□□□ 0.15
USE1-205ENST00000594724 CUL4BQ13620 913 aa16.01■□□□□ 0.15
USE1-205ENST00000594724 MRPL58Q14197 206 aaKnown RBP16.01■□□□□ 0.15
USE1-205ENST00000594724 CNNM4Q6P4Q7 775 aa16.01■□□□□ 0.15
USE1-205ENST00000594724 TDRD5Q8NAT2 981 aaKnown RBP16.01■□□□□ 0.15
USE1-205ENST00000594724 NOC3LQ8WTT2 800 aaKnown RBP16.01■□□□□ 0.15
USE1-205ENST00000594724 EDAQ92838 391 aa16.01■□□□□ 0.15
USE1-205ENST00000594724 CBWD1Q9BRT8 395 aa16.01■□□□□ 0.15
USE1-205ENST00000594724 ASB7Q9H672 318 aa16.01■□□□□ 0.15
USE1-205ENST00000594724 MAGEF1Q9HAY2 307 aa16.01■□□□□ 0.15
USE1-205ENST00000594724 WDR6Q9NNW5 1121 aaKnown RBP16.01■□□□□ 0.15
USE1-205ENST00000594724 RAPGEFL1Q9UHV5 662 aa16.01■□□□□ 0.15
USE1-205ENST00000594724 PCDHB8Q9UN66 801 aa16.01■□□□□ 0.15
USE1-205ENST00000594724 USTQ9Y2C2 406 aa16.01■□□□□ 0.15
USE1-205ENST00000594724 H7C4K7 107 aa16■□□□□ 0.15
USE1-205ENST00000594724 M0QZQ0 153 aa16■□□□□ 0.15
USE1-205ENST00000594724 CCL16O15467 120 aa16■□□□□ 0.15
USE1-205ENST00000594724 N4BP1O75113 896 aaKnown RBP16■□□□□ 0.15
USE1-205ENST00000594724 PAPLNO95428 1278 aa16■□□□□ 0.15
USE1-205ENST00000594724 ASGR2P07307 311 aa16■□□□□ 0.15
USE1-205ENST00000594724 C8AP07357 584 aa16■□□□□ 0.15
USE1-205ENST00000594724 PFKFB1P16118 471 aa16■□□□□ 0.15
USE1-205ENST00000594724 COL9A1P20849 921 aa16■□□□□ 0.15
USE1-205ENST00000594724 GARTP22102 1010 aa16■□□□□ 0.15
USE1-205ENST00000594724 CMA1P23946 247 aa16■□□□□ 0.15
USE1-205ENST00000594724 HOXD13P35453 343 aa16■□□□□ 0.15
USE1-205ENST00000594724 WNT7BP56706 349 aa16■□□□□ 0.15
USE1-205ENST00000594724 ZXDAP98168 799 aa16■□□□□ 0.15
USE1-205ENST00000594724 ROR1Q01973 937 aa16■□□□□ 0.15
USE1-205ENST00000594724 CTXN3Q4LDR2 81 aa16■□□□□ 0.15
USE1-205ENST00000594724 FAM26FQ5R3K3 315 aa16■□□□□ 0.15
USE1-205ENST00000594724 PPM1LQ5SGD2 360 aa16■□□□□ 0.15
USE1-205ENST00000594724 LIN9Q5TKA1 542 aa16■□□□□ 0.15
USE1-205ENST00000594724 SLC8B1Q6J4K2 584 aa16■□□□□ 0.15
USE1-205ENST00000594724 CYP26C1Q6V0L0 522 aa16■□□□□ 0.15
USE1-205ENST00000594724 DSTYKQ6XUX3 929 aa16■□□□□ 0.15
USE1-205ENST00000594724 STXBP4Q6ZWJ1 553 aa16■□□□□ 0.15
USE1-205ENST00000594724 UNC13DQ70J99 1090 aa16■□□□□ 0.15
USE1-205ENST00000594724 CEP57L1Q8IYX8 460 aa16■□□□□ 0.15
USE1-205ENST00000594724 ZDHHC14Q8IZN3 488 aa16■□□□□ 0.15
USE1-205ENST00000594724 PLCD3Q8N3E9 789 aa16■□□□□ 0.15
USE1-205ENST00000594724 APPL2Q8NEU8 664 aa16■□□□□ 0.15
USE1-205ENST00000594724 SLC7A14Q8TBB6 771 aa16■□□□□ 0.15
USE1-205ENST00000594724 ACSF2Q96CM8 615 aaPredicted RBP16■□□□□ 0.15
USE1-205ENST00000594724 RHOBTB2Q9BYZ6 727 aa16■□□□□ 0.15
USE1-205ENST00000594724 TMEM206Q9H813 350 aa16■□□□□ 0.15
USE1-205ENST00000594724 FBXL5Q9UKA1 691 aa16■□□□□ 0.15
USE1-205ENST00000594724 DERAQ9Y315 318 aa16■□□□□ 0.15
USE1-205ENST00000594724 C2orf16Q68DN1 1984 aa16■□□□□ 0.15
USE1-205ENST00000594724 CLUHO75153 1309 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 WDR27A2RRH5 827 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 PIRO00625 290 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 SPTLC1O15269 473 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 ACTN4O43707 911 aaKnown RBP15.99■□□□□ 0.15
USE1-205ENST00000594724 LDHAP00338 332 aaKnown RBP15.99■□□□□ 0.15
USE1-205ENST00000594724 SLFN14P0C7P3 912 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 AARSP49588 968 aaKnown RBP eCLIP15.99■□□□□ 0.15
USE1-205ENST00000594724 LILRA4P59901 499 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 NTHL1P78549 312 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 POU5F1Q01860 360 aaKnown RBP15.99■□□□□ 0.15
USE1-205ENST00000594724 EHHADHQ08426 723 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 PTPN21Q16825 1174 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 C9orf57Q5W0N0 161 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 ARMCX5Q6P1M9 558 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 EPM2AIP1Q7L775 607 aaPredicted RBP15.99■□□□□ 0.15
USE1-205ENST00000594724 OTOP3Q7RTS5 596 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 EFCAB13Q8IY85 973 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 PAGE5Q96GU1 130 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 PYM1Q9BRP8 204 aaKnown RBP15.99■□□□□ 0.15
USE1-205ENST00000594724 GDPD2Q9HCC8 539 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 SLC39A2Q9NP94 309 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 DPP3Q9NY33 737 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 POLIQ9UNA4 740 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 C2CD2Q9Y426 696 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 ATP6V1DQ9Y5K8 247 aa15.99■□□□□ 0.15
USE1-205ENST00000594724 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.99■□□□□ 0.15
USE1-205ENST00000594724 MTCL1Q9Y4B5 1905 aaKnown RBP15.99■□□□□ 0.15
USE1-205ENST00000594724 PVALEFA0A1B0GWK0 134 aa15.98■□□□□ 0.15
USE1-205ENST00000594724 ANO9A1A5B4 782 aa15.98■□□□□ 0.15
USE1-205ENST00000594724 PRR33A8MZF0 331 aa15.98■□□□□ 0.15
USE1-205ENST00000594724 ABLIM3O94929 683 aa15.98■□□□□ 0.15
USE1-205ENST00000594724 IL18RAPO95256 599 aa15.98■□□□□ 0.15
USE1-205ENST00000594724 HNRNPA1P09651 372 aaKnown RBP eCLIP15.98■□□□□ 0.15
USE1-205ENST00000594724 GBP2P32456 591 aaPredicted RBP15.98■□□□□ 0.15
USE1-205ENST00000594724 UVSSAQ2YD98 709 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms