RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 NOLC1Q14978 699 aaKnown RBP eCLIP11.66□□□□□ -0.54
USE1-203ENST00000593597 UBXN2BQ14CS0 331 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 TMEM119Q4V9L6 283 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 FAM78AQ5JUQ0 283 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 KRT79Q5XKE5 535 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 RNF19BQ6ZMZ0 732 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 RTL10Q7L3V2 364 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 TCEAL8Q8IYN2 117 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 SPIRE2Q8WWL2 714 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 DDX12PQ92771 950 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 NELL1Q92832 810 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 CLDN23Q96B33 292 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 RSPRY1Q96DX4 576 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 DRC1Q96MC2 740 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 TBC1D32Q96NH3 1257 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 ACAP3Q96P50 834 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 CORO1BQ9BR76 489 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 LRRC3Q9BY71 257 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 HEBP1Q9NRV9 189 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 TOPORSQ9NS56 1045 aaPredicted RBP11.66□□□□□ -0.54
USE1-203ENST00000593597 ANKFY1Q9P2R3 1169 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 FAM170BA6NMN3 283 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 TRAPPC3O43617 180 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 TOM1L1O75674 476 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 OR4Q2P0C623 313 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 TDGF1P13385 188 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 PLS3P13797 630 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 AARSP49588 968 aaKnown RBP eCLIP11.65□□□□□ -0.54
USE1-203ENST00000593597 NCKAP1LP55160 1127 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 GRIN1Q05586 938 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 MCL1Q07820 350 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 ZBTB6Q15916 424 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 CTXN3Q4LDR2 81 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 WDR44Q5JSH3 913 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 SLC39A4Q6P5W5 647 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 TSSK4Q6SA08 328 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 VITQ6UXI7 678 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 DTHD1Q6ZMT9 781 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 TMC8Q8IU68 726 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 KIAA2013Q8IYS2 634 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 SYT2Q8N9I0 419 aaPredicted RBP11.65□□□□□ -0.54
USE1-203ENST00000593597 ELSPBP1Q96BH3 223 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 ASB16Q96NS5 453 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 OSBPL6Q9BZF3 934 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 DNAJC25Q9H1X3 360 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 C17orf75Q9HAS0 396 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 CYP4F11Q9HBI6 524 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 SLC38A7Q9NVC3 462 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 GDE1Q9NZC3 331 aa11.65□□□□□ -0.54
USE1-203ENST00000593597 RBM19Q9Y4C8 960 aaKnown RBP11.65□□□□□ -0.54
USE1-203ENST00000593597 TIMM13Q9Y5L4 95 aaPredicted RBP11.65□□□□□ -0.54
USE1-203ENST00000593597 MYO16Q9Y6X6 1858 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 TTC26A0AVF1 554 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 M0QZQ0 153 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 ARNTLO00327 626 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 LAD1O00515 517 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 PRRG1O14668 218 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 LRG1P02750 347 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 PLA2G4BP0C869 781 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 PTPN2P17706 415 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 LRPAP1P30533 357 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 RPL9P32969 192 aaKnown RBP11.64□□□□□ -0.55
USE1-203ENST00000593597 MCM4P33991 863 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 EPHA5P54756 1037 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 ADCY1Q08828 1119 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 TWF1Q12792 350 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 ZRSR1Q15695 479 aaKnown RBP11.64□□□□□ -0.55
USE1-203ENST00000593597 ERICH6BQ5W0A0 696 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 ZPBP2Q6X784 338 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 APBB1IPQ7Z5R6 666 aaPredicted RBP11.64□□□□□ -0.55
USE1-203ENST00000593597 MAP4K3Q8IVH8 894 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 TTC9BQ8N6N2 239 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 BEST2Q8NFU1 509 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 SHKBP1Q8TBC3 707 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 KCNG4Q8TDN1 519 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 KCNN1Q92952 543 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 SHDQ96IW2 340 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 TMEM209Q96SK2 561 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 FIZ1Q96SL8 496 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 TCHPQ9BT92 498 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 RAB34Q9BZG1 259 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 SEMA4AQ9H3S1 761 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 PRMT8Q9NR22 394 aaPredicted RBP11.64□□□□□ -0.55
USE1-203ENST00000593597 BLOC1S4Q9NUP1 217 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 SPATA6Q9NWH7 488 aaPredicted RBP11.64□□□□□ -0.55
USE1-203ENST00000593597 AFF4Q9UHB7 1163 aaKnown RBP11.64□□□□□ -0.55
USE1-203ENST00000593597 PCDHB8Q9UN66 801 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 YIPF1Q9Y548 306 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 STK24Q9Y6E0 443 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 EML5Q05BV3 1969 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 KIAA1549LQ6ZVL6 1849 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 SPTBN2O15020 2390 aa11.64□□□□□ -0.55
USE1-203ENST00000593597 MED19A0JLT2 244 aaPredicted RBP11.63□□□□□ -0.55
USE1-203ENST00000593597 VWA3AA6NCI4 1184 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 LILRB5O75023 590 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 VIPR2P41587 438 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 PFKPQ01813 784 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 CSTF1Q05048 431 aaKnown RBP11.63□□□□□ -0.55
USE1-203ENST00000593597 ENOX2Q16206 610 aaKnown RBP11.63□□□□□ -0.55
USE1-203ENST00000593597 ZNF528Q3MIS6 628 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms