RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 LIN9Q5TKA1 542 aa15.73■□□□□ 0.11
CACTIN-206ENST00000588749 SPATA1Q5VX52 437 aa15.73■□□□□ 0.11
CACTIN-206ENST00000588749 CRELD2Q6UXH1 353 aaPredicted RBP15.73■□□□□ 0.11
CACTIN-206ENST00000588749 RSPO2Q6UXX9 243 aaPredicted RBP15.73■□□□□ 0.11
CACTIN-206ENST00000588749 CCDC149Q6ZUS6 474 aa15.73■□□□□ 0.11
CACTIN-206ENST00000588749 UNC13DQ70J99 1090 aa15.73■□□□□ 0.11
CACTIN-206ENST00000588749 GRAMD1CQ8IYS0 662 aa15.73■□□□□ 0.11
CACTIN-206ENST00000588749 BEST2Q8NFU1 509 aa15.73■□□□□ 0.11
CACTIN-206ENST00000588749 SUSD3Q96L08 255 aa15.73■□□□□ 0.11
CACTIN-206ENST00000588749 TSPAN18Q96SJ8 248 aa15.73■□□□□ 0.11
CACTIN-206ENST00000588749 CBWD1Q9BRT8 395 aa15.73■□□□□ 0.11
CACTIN-206ENST00000588749 FAM213AQ9BRX8 229 aa15.73■□□□□ 0.11
CACTIN-206ENST00000588749 ASB7Q9H672 318 aa15.73■□□□□ 0.11
CACTIN-206ENST00000588749 BACE2Q9Y5Z0 518 aa15.73■□□□□ 0.11
CACTIN-206ENST00000588749 C2CD4DB7Z1M9 353 aa15.72■□□□□ 0.11
CACTIN-206ENST00000588749 TULP1O00294 542 aaPredicted RBP15.72■□□□□ 0.11
CACTIN-206ENST00000588749 PPEF2O14830 753 aa15.72■□□□□ 0.11
CACTIN-206ENST00000588749 ACTN4O43707 911 aaKnown RBP15.72■□□□□ 0.11
CACTIN-206ENST00000588749 SLFN14P0C7P3 912 aa15.72■□□□□ 0.11
CACTIN-206ENST00000588749 GARTP22102 1010 aa15.72■□□□□ 0.11
CACTIN-206ENST00000588749 CUL4BQ13620 913 aa15.72■□□□□ 0.11
CACTIN-206ENST00000588749 RAB33AQ14088 237 aa15.72■□□□□ 0.11
CACTIN-206ENST00000588749 TDRD5Q8NAT2 981 aaKnown RBP15.72■□□□□ 0.11
CACTIN-206ENST00000588749 ZSWIM2Q8NEG5 633 aa15.72■□□□□ 0.11
CACTIN-206ENST00000588749 NOC3LQ8WTT2 800 aaKnown RBP15.72■□□□□ 0.11
CACTIN-206ENST00000588749 SMG7Q92540 1137 aaKnown RBP15.72■□□□□ 0.11
CACTIN-206ENST00000588749 SCAND2PQ9GZW5 306 aaPredicted RBP15.72■□□□□ 0.11
CACTIN-206ENST00000588749 ZDHHC7Q9NXF8 308 aa15.72■□□□□ 0.11
CACTIN-206ENST00000588749 DERAQ9Y315 318 aa15.72■□□□□ 0.11
CACTIN-206ENST00000588749 MYO10Q9HD67 2058 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 GOLGA8IPA6NC78 632 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 GOLGA8JA6NMD2 632 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 EIF3DO15371 548 aaKnown RBP eCLIP15.71■□□□□ 0.11
CACTIN-206ENST00000588749 ZMYND10O75800 440 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 C8AP07357 584 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 POU5F1Q01860 360 aaKnown RBP15.71■□□□□ 0.11
CACTIN-206ENST00000588749 TMEM31Q5JXX7 168 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 ARMCX5Q6P1M9 558 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 BRSK2Q8IWQ3 736 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 EFCAB13Q8IY85 973 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 APPL2Q8NEU8 664 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 ZNF707Q96C28 371 aaPredicted RBP15.71■□□□□ 0.11
CACTIN-206ENST00000588749 PRKD2Q9BZL6 878 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 PCIF1Q9H4Z3 704 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 PIDD1Q9HB75 910 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 GDPD2Q9HCC8 539 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 C11orf16Q9NQ32 467 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 PCDHB8Q9UN66 801 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 HPSEQ9Y251 543 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 C2CD2Q9Y426 696 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 SCN1AP35498 2009 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 DOCK6Q96HP0 2047 aa15.71■□□□□ 0.11
CACTIN-206ENST00000588749 TECTAO75443 2155 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 H7C4K7 107 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 IL18RAPO95256 599 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 LDHAP00338 332 aaKnown RBP15.7■□□□□ 0.1
CACTIN-206ENST00000588749 HOXD13P35453 343 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 SYKP43405 635 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 AARSP49588 968 aaKnown RBP eCLIP15.7■□□□□ 0.13e-6■■■■■ 61.8
CACTIN-206ENST00000588749 ARPP19P56211 112 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 ROR1Q01973 937 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 EHHADHQ08426 723 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 CTXN3Q4LDR2 81 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 PPM1LQ5SGD2 360 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 C9orf57Q5W0N0 161 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 SLC8B1Q6J4K2 584 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 ZNF280DQ6N043 979 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 CYP26C1Q6V0L0 522 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 DSTYKQ6XUX3 929 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 EPM2AIP1Q7L775 607 aaPredicted RBP15.7■□□□□ 0.1
CACTIN-206ENST00000588749 SLC7A14Q8TBB6 771 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 PAGE5Q96GU1 130 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 RHOBTB2Q9BYZ6 727 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 RBAKQ9NYW8 714 aaPredicted RBP15.7■□□□□ 0.1
CACTIN-206ENST00000588749 FBXL5Q9UKA1 691 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 USTQ9Y2C2 406 aa15.7■□□□□ 0.1
CACTIN-206ENST00000588749 TIMM13Q9Y5L4 95 aaPredicted RBP15.7■□□□□ 0.1
CACTIN-206ENST00000588749 CLUHO75153 1309 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 PVALEFA0A1B0GWK0 134 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 M0QZQ0 153 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 EXTL3O43909 919 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 PAPLNO95428 1278 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 NDUFA8P51970 172 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 WNT7BP56706 349 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 NUCB2P80303 420 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 MRPL58Q14197 206 aaKnown RBP15.69■□□□□ 0.1
CACTIN-206ENST00000588749 OTOP3Q7RTS5 596 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 NELFCDQ8IXH7 590 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 GPD1LQ8N335 351 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 FSIP1Q8NA03 581 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 ZNF507Q8TCN5 953 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 SCFD1Q8WVM8 642 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 ACSF2Q96CM8 615 aaPredicted RBP15.69■□□□□ 0.1
CACTIN-206ENST00000588749 WDR6Q9NNW5 1121 aaKnown RBP15.69■□□□□ 0.1
CACTIN-206ENST00000588749 SLC39A2Q9NP94 309 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 DPP3Q9NY33 737 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 USP25Q9UHP3 1055 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 DOCK8Q8NF50 2099 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 TRIOO75962 3097 aa15.69■□□□□ 0.1
CACTIN-206ENST00000588749 UBE4BO95155 1302 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms