RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 VWA8A3KMH1 1905 aa14□□□□□ -0.17
SS18-219ENST00000581570 NCANO14594 1321 aa14□□□□□ -0.17
SS18-219ENST00000581570 ARID2Q68CP9 1835 aa14□□□□□ -0.17
SS18-219ENST00000581570 SMIM28A0A1B0GU29 152 aa14□□□□□ -0.17
SS18-219ENST00000581570 FAM205CA6NFA0 338 aa14□□□□□ -0.17
SS18-219ENST00000581570 SYN3O14994 580 aa14□□□□□ -0.17
SS18-219ENST00000581570 CHADO15335 359 aa14□□□□□ -0.17
SS18-219ENST00000581570 CDKL5O76039 1030 aa14□□□□□ -0.17
SS18-219ENST00000581570 EDN1P05305 212 aa14□□□□□ -0.17
SS18-219ENST00000581570 PROS1P07225 676 aa14□□□□□ -0.17
SS18-219ENST00000581570 ZNF806P0C7X5 589 aa14□□□□□ -0.17
SS18-219ENST00000581570 HOXA6P31267 233 aa14□□□□□ -0.17
SS18-219ENST00000581570 TXKP42681 527 aa14□□□□□ -0.17
SS18-219ENST00000581570 SOX9P48436 509 aa14□□□□□ -0.17
SS18-219ENST00000581570 TWF1Q12792 350 aa14□□□□□ -0.17
SS18-219ENST00000581570 COL9A2Q14055 689 aaPredicted RBP14□□□□□ -0.17
SS18-219ENST00000581570 TEAD2Q15562 447 aa14□□□□□ -0.17
SS18-219ENST00000581570 CCDC6Q16204 474 aa14□□□□□ -0.17
SS18-219ENST00000581570 LEMD2Q8NC56 503 aa14□□□□□ -0.17
SS18-219ENST00000581570 GPR88Q9GZN0 384 aa14□□□□□ -0.17
SS18-219ENST00000581570 CCDC113Q9H0I3 377 aa14□□□□□ -0.17
SS18-219ENST00000581570 SLITRK6Q9H5Y7 841 aa14□□□□□ -0.17
SS18-219ENST00000581570 ZSWIM6Q9HCJ5 1215 aa14□□□□□ -0.17
SS18-219ENST00000581570 ASAH2Q9NR71 780 aa14□□□□□ -0.17
SS18-219ENST00000581570 RXFP3Q9NSD7 469 aa14□□□□□ -0.17
SS18-219ENST00000581570 C2orf42Q9NWW7 574 aa14□□□□□ -0.17
SS18-219ENST00000581570 CEP72Q9P209 647 aa14□□□□□ -0.17
SS18-219ENST00000581570 DAXXQ9UER7 740 aaPredicted RBP14□□□□□ -0.17
SS18-219ENST00000581570 FBXL5Q9UKA1 691 aa14□□□□□ -0.17
SS18-219ENST00000581570 F5P12259 2224 aa13.99□□□□□ -0.17
SS18-219ENST00000581570 SLC38A8A6NNN8 435 aa13.99□□□□□ -0.17
SS18-219ENST00000581570 PODXLO00592 558 aa13.99□□□□□ -0.17
SS18-219ENST00000581570 HOXC13P31276 330 aa13.99□□□□□ -0.17
SS18-219ENST00000581570 NAMPTP43490 491 aa13.99□□□□□ -0.17
SS18-219ENST00000581570 EPHA5P54756 1037 aa13.99□□□□□ -0.17
SS18-219ENST00000581570 SOX4Q06945 474 aaPredicted RBP13.99□□□□□ -0.17
SS18-219ENST00000581570 MRPL58Q14197 206 aaKnown RBP13.99□□□□□ -0.17
SS18-219ENST00000581570 CTXN3Q4LDR2 81 aa13.99□□□□□ -0.17
SS18-219ENST00000581570 WDR44Q5JSH3 913 aa13.99□□□□□ -0.17
SS18-219ENST00000581570 STPG1Q5TH74 334 aa13.99□□□□□ -0.17
SS18-219ENST00000581570 APBB1IPQ7Z5R6 666 aaPredicted RBP13.99□□□□□ -0.17
SS18-219ENST00000581570 FAM200AQ8TCP9 573 aa13.99□□□□□ -0.17
SS18-219ENST00000581570 LOXL4Q96JB6 756 aa13.99□□□□□ -0.17
SS18-219ENST00000581570 AFF4Q9UHB7 1163 aaKnown RBP13.99□□□□□ -0.17
SS18-219ENST00000581570 CYP46A1Q9Y6A2 500 aa13.99□□□□□ -0.17
SS18-219ENST00000581570 MYBPHLA2RUH7 354 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 SPECC1L-ADORA2AF8WAN1 911 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 KCNK5O95279 499 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 SPATA31C1P0DKV0 1188 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 YARSP54577 528 aaKnown RBP13.98□□□□□ -0.17
SS18-219ENST00000581570 NR5A1Q13285 461 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 PPP2R5AQ15172 486 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 NT5DC1Q5TFE4 455 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 ATF7IP2Q5U623 682 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 TXNDC11Q6PKC3 985 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 CACNA2D4Q7Z3S7 1137 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 RALGPS2Q86X27 583 aaPredicted RBP13.98□□□□□ -0.17
SS18-219ENST00000581570 TTC8Q8TAM2 541 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 SHKBP1Q8TBC3 707 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 RSPRY1Q96DX4 576 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 NACC1Q96RE7 527 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 SLC38A7Q9NVC3 462 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 MAFFQ9ULX9 164 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 NUB1Q9Y5A7 615 aa13.98□□□□□ -0.17
SS18-219ENST00000581570 USP24Q9UPU5 2620 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 CHD8Q9HCK8 2581 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 STK36Q9NRP7 1315 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 NEMFO60524 1076 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 DTNBO60941 627 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 EPN2O95208 641 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 CYP11B2P19099 503 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 CTHP32929 405 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 KRT2P35908 639 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 GRM5P41594 1212 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 EFNA5P52803 228 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 FCHO2Q0JRZ9 810 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 PON2Q15165 354 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 XKR4Q5GH76 650 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 ZNF280DQ6N043 979 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 PADI6Q6TGC4 694 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 ALKAL1Q6UXT8 129 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 CATSPER3Q86XQ3 398 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 GPIHBP1Q8IV16 184 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 SYNPOQ8N3V7 929 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 GAB3Q8WWW8 586 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 KIFC3Q9BVG8 833 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 CCDC94Q9BW85 323 aaPredicted RBP13.97□□□□□ -0.17
SS18-219ENST00000581570 LSM14BQ9BX40 385 aaKnown RBP13.97□□□□□ -0.17
SS18-219ENST00000581570 TUFT1Q9NNX1 390 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 TOPORSQ9NS56 1045 aaPredicted RBP13.97□□□□□ -0.17
SS18-219ENST00000581570 COL4A2P08572 1712 aa13.97□□□□□ -0.17
SS18-219ENST00000581570 A0A1W2PRU2 124 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 ARHGEF35A5YM69 484 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 MED24O75448 989 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 RPP40O75818 363 aaKnown RBP13.96□□□□□ -0.17
SS18-219ENST00000581570 CPB1P15086 417 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 RPL9P32969 192 aaKnown RBP13.96□□□□□ -0.17
SS18-219ENST00000581570 RAP1GAPP47736 663 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 PXNP49023 591 aaPredicted RBP13.96□□□□□ -0.17
SS18-219ENST00000581570 OSTNP61366 133 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms