RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 OTOP3Q7RTS5 596 aa28.45■■■□□ 2.14
LIMD2-208ENST00000579814 ACSF2Q96CM8 615 aaPredicted RBP28.45■■■□□ 2.14
LIMD2-208ENST00000579814 LRFN3Q9BTN0 628 aa28.45■■■□□ 2.14
LIMD2-208ENST00000579814 C2CD2Q9Y426 696 aa28.45■■■□□ 2.14
LIMD2-208ENST00000579814 FAM86C2PA6NEL3 165 aa28.44■■■□□ 2.14
LIMD2-208ENST00000579814 PAPLNO95428 1278 aa28.44■■■□□ 2.14
LIMD2-208ENST00000579814 NFICP08651 508 aa28.44■■■□□ 2.14
LIMD2-208ENST00000579814 RSPO2Q6UXX9 243 aaPredicted RBP28.44■■■□□ 2.14
LIMD2-208ENST00000579814 UNC13DQ70J99 1090 aa28.44■■■□□ 2.14
LIMD2-208ENST00000579814 ZDHHC14Q8IZN3 488 aa28.44■■■□□ 2.14
LIMD2-208ENST00000579814 HPS3Q969F9 1004 aa28.44■■■□□ 2.14
LIMD2-208ENST00000579814 ZNF707Q96C28 371 aaPredicted RBP28.44■■■□□ 2.14
LIMD2-208ENST00000579814 FAM213AQ9BRX8 229 aa28.44■■■□□ 2.14
LIMD2-208ENST00000579814 SCAND2PQ9GZW5 306 aaPredicted RBP28.44■■■□□ 2.14
LIMD2-208ENST00000579814 WDR6Q9NNW5 1121 aaKnown RBP28.44■■■□□ 2.14
LIMD2-208ENST00000579814 C11orf16Q9NQ32 467 aa28.44■■■□□ 2.14
LIMD2-208ENST00000579814 PCDHB8Q9UN66 801 aa28.44■■■□□ 2.14
LIMD2-208ENST00000579814 IL18RAPO95256 599 aa28.43■■■□□ 2.14
LIMD2-208ENST00000579814 C8AP07357 584 aa28.43■■■□□ 2.14
LIMD2-208ENST00000579814 PAX3P23760 479 aa28.43■■■□□ 2.14
LIMD2-208ENST00000579814 AFMP43652 599 aa28.43■■■□□ 2.14
LIMD2-208ENST00000579814 GUCY2FP51841 1108 aa28.43■■■□□ 2.14
LIMD2-208ENST00000579814 MRPL58Q14197 206 aaKnown RBP28.43■■■□□ 2.14
LIMD2-208ENST00000579814 UVSSAQ2YD98 709 aa28.43■■■□□ 2.14
LIMD2-208ENST00000579814 FAM26FQ5R3K3 315 aa28.43■■■□□ 2.14
LIMD2-208ENST00000579814 PPM1LQ5SGD2 360 aa28.43■■■□□ 2.14
LIMD2-208ENST00000579814 CRELD2Q6UXH1 353 aaPredicted RBP28.43■■■□□ 2.14
LIMD2-208ENST00000579814 EDAQ92838 391 aa28.43■■■□□ 2.14
LIMD2-208ENST00000579814 BLZF1Q9H2G9 400 aa28.43■■■□□ 2.14
LIMD2-208ENST00000579814 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.42■■■□□ 2.14
LIMD2-208ENST00000579814 TULP1O00294 542 aaPredicted RBP28.42■■■□□ 2.14
LIMD2-208ENST00000579814 HNRNPA1P09651 372 aaKnown RBP eCLIP28.42■■■□□ 2.14
LIMD2-208ENST00000579814 SLFN14P0C7P3 912 aa28.42■■■□□ 2.14
LIMD2-208ENST00000579814 CTXN3Q4LDR2 81 aa28.42■■■□□ 2.14
LIMD2-208ENST00000579814 SLC8B1Q6J4K2 584 aa28.42■■■□□ 2.14
LIMD2-208ENST00000579814 DSTYKQ6XUX3 929 aa28.42■■■□□ 2.14
LIMD2-208ENST00000579814 RTL10Q7L3V2 364 aa28.42■■■□□ 2.14
LIMD2-208ENST00000579814 TMEM130Q8N3G9 435 aa28.42■■■□□ 2.14
LIMD2-208ENST00000579814 CHAMP1Q96JM3 812 aa28.42■■■□□ 2.14
LIMD2-208ENST00000579814 SERTAD1Q9UHV2 236 aa28.42■■■□□ 2.14
LIMD2-208ENST00000579814 C5orf42Q9H799 3197 aa28.42■■■□□ 2.14
LIMD2-208ENST00000579814 A0A1B0GVL5 298 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 PVALEFA0A1B0GWK0 134 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 M0QZQ0 153 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 KIAA0391O15091 583 aaKnown RBP28.41■■■□□ 2.14
LIMD2-208ENST00000579814 EIF3DO15371 548 aaKnown RBP eCLIP28.41■■■□□ 2.14
LIMD2-208ENST00000579814 TBC1D4O60343 1298 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 ARPP19P56211 112 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 C9orf57Q5W0N0 161 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 ZNF280DQ6N043 979 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 ARMCX5Q6P1M9 558 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 NT5DC4Q86YG4 428 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 GLIS3Q8NEA6 775 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 ZNF461Q8TAF7 563 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 SAAL1Q96ER3 474 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 LIMD1Q9UGP4 676 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 USP25Q9UHP3 1055 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 FBXL5Q9UKA1 691 aa28.41■■■□□ 2.14
LIMD2-208ENST00000579814 PRR33A8MZF0 331 aa28.4■■■□□ 2.14
LIMD2-208ENST00000579814 EXTL3O43909 919 aa28.4■■■□□ 2.14
LIMD2-208ENST00000579814 PFKFB1P16118 471 aa28.4■■■□□ 2.14
LIMD2-208ENST00000579814 CASP1P29466 404 aa28.4■■■□□ 2.14
LIMD2-208ENST00000579814 HOXA9P31269 272 aa28.4■■■□□ 2.14
LIMD2-208ENST00000579814 ELF1P32519 619 aa28.4■■■□□ 2.14
LIMD2-208ENST00000579814 AARSP49588 968 aaKnown RBP eCLIP28.4■■■□□ 2.14
LIMD2-208ENST00000579814 ZXDAP98168 799 aa28.4■■■□□ 2.14
LIMD2-208ENST00000579814 PTPN21Q16825 1174 aa28.4■■■□□ 2.14
LIMD2-208ENST00000579814 USP37Q86T82 979 aa28.4■■■□□ 2.14
LIMD2-208ENST00000579814 SLC7A14Q8TBB6 771 aa28.4■■■□□ 2.14
LIMD2-208ENST00000579814 ZNF507Q8TCN5 953 aa28.4■■■□□ 2.14
LIMD2-208ENST00000579814 CBWD1Q9BRT8 395 aa28.4■■■□□ 2.14
LIMD2-208ENST00000579814 PCIF1Q9H4Z3 704 aa28.4■■■□□ 2.14
LIMD2-208ENST00000579814 DPP3Q9NY33 737 aa28.4■■■□□ 2.14
LIMD2-208ENST00000579814 XYLBO75191 536 aa28.39■■■□□ 2.14
LIMD2-208ENST00000579814 LILRA4P59901 499 aa28.39■■■□□ 2.14
LIMD2-208ENST00000579814 ROR1Q01973 937 aa28.39■■■□□ 2.14
LIMD2-208ENST00000579814 YWHAHQ04917 246 aaPredicted RBP28.39■■■□□ 2.14
LIMD2-208ENST00000579814 CUL4BQ13620 913 aa28.39■■■□□ 2.14
LIMD2-208ENST00000579814 BRSK2Q8IWQ3 736 aa28.39■■■□□ 2.14
LIMD2-208ENST00000579814 NOC3LQ8WTT2 800 aaKnown RBP28.39■■■□□ 2.14
LIMD2-208ENST00000579814 PAGE5Q96GU1 130 aa28.39■■■□□ 2.14
LIMD2-208ENST00000579814 OXCT2Q9BYC2 517 aaPredicted RBP28.39■■■□□ 2.14
LIMD2-208ENST00000579814 RBAKQ9NYW8 714 aaPredicted RBP28.39■■■□□ 2.14
LIMD2-208ENST00000579814 CLUHO75153 1309 aa28.39■■■□□ 2.13
LIMD2-208ENST00000579814 ANO9A1A5B4 782 aa28.38■■■□□ 2.13
LIMD2-208ENST00000579814 GOLGA8IPA6NC78 632 aa28.38■■■□□ 2.13
LIMD2-208ENST00000579814 GOLGA8JA6NMD2 632 aa28.38■■■□□ 2.13
LIMD2-208ENST00000579814 PIRO00625 290 aa28.38■■■□□ 2.13
LIMD2-208ENST00000579814 ACTN4O43707 911 aaKnown RBP28.38■■■□□ 2.13
LIMD2-208ENST00000579814 ABLIM3O94929 683 aa28.38■■■□□ 2.13
LIMD2-208ENST00000579814 EPM2AIP1Q7L775 607 aaPredicted RBP28.38■■■□□ 2.13
LIMD2-208ENST00000579814 GPD1LQ8N335 351 aa28.38■■■□□ 2.13
LIMD2-208ENST00000579814 TIMM13Q9Y5L4 95 aaPredicted RBP28.38■■■□□ 2.13
LIMD2-208ENST00000579814 TRIP11Q15643 1979 aa28.37■■■□□ 2.13
LIMD2-208ENST00000579814 ARHGEF37A1IGU5 675 aa28.37■■■□□ 2.13
LIMD2-208ENST00000579814 PPEF2O14830 753 aa28.37■■■□□ 2.13
LIMD2-208ENST00000579814 CCL16O15467 120 aa28.37■■■□□ 2.13
LIMD2-208ENST00000579814 OAZ2O95190 189 aa28.37■■■□□ 2.13
LIMD2-208ENST00000579814 GBP2P32456 591 aaPredicted RBP28.37■■■□□ 2.13
LIMD2-208ENST00000579814 NUCB2P80303 420 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms