RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 GARTP22102 1010 aa16.81■□□□□ 0.28
CCDC113-203ENST00000561517 CMA1P23946 247 aa16.81■□□□□ 0.28
CCDC113-203ENST00000561517 MCM4P33991 863 aa16.81■□□□□ 0.28
CCDC113-203ENST00000561517 OR1D2P34982 312 aa16.81■□□□□ 0.28
CCDC113-203ENST00000561517 AARSP49588 968 aaKnown RBP eCLIP16.81■□□□□ 0.28
CCDC113-203ENST00000561517 EHHADHQ08426 723 aa16.81■□□□□ 0.28
CCDC113-203ENST00000561517 TMEM31Q5JXX7 168 aa16.81■□□□□ 0.28
CCDC113-203ENST00000561517 VARS2Q5ST30 1063 aaKnown RBP16.81■□□□□ 0.28
CCDC113-203ENST00000561517 JADE1Q6IE81 842 aa16.81■□□□□ 0.28
CCDC113-203ENST00000561517 RSPO2Q6UXX9 243 aaPredicted RBP16.81■□□□□ 0.28
CCDC113-203ENST00000561517 FAM212AQ96EL1 285 aa16.81■□□□□ 0.28
CCDC113-203ENST00000561517 PRKD2Q9BZL6 878 aa16.81■□□□□ 0.28
CCDC113-203ENST00000561517 CDY1Q9Y6F8 540 aa16.81■□□□□ 0.28
CCDC113-203ENST00000561517 TRIOO75962 3097 aa16.81■□□□□ 0.28
CCDC113-203ENST00000561517 M0QZQ0 153 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 NFICP08651 508 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 SLFN14P0C7P3 912 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 SP100P23497 879 aaPredicted RBP16.8■□□□□ 0.28
CCDC113-203ENST00000561517 GUCY2FP51841 1108 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 TMEM132DQ14C87 1099 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 SLC8B1Q6J4K2 584 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 CCDC149Q6ZUS6 474 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 STXBP4Q6ZWJ1 553 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 UNC13DQ70J99 1090 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 EPM2AIP1Q7L775 607 aaPredicted RBP16.8■□□□□ 0.28
CCDC113-203ENST00000561517 ZDHHC14Q8IZN3 488 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 SYCP3Q8IZU3 236 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 GLIS3Q8NEA6 775 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 BEST2Q8NFU1 509 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 SMG7Q92540 1137 aaKnown RBP16.8■□□□□ 0.28
CCDC113-203ENST00000561517 HPS3Q969F9 1004 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 LRFN3Q9BTN0 628 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 WDR6Q9NNW5 1121 aaKnown RBP16.8■□□□□ 0.28
CCDC113-203ENST00000561517 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 PCDHB8Q9UN66 801 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 C2CD2Q9Y426 696 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 ZDBF2Q9HCK1 2354 aa16.8■□□□□ 0.28
CCDC113-203ENST00000561517 ZNF318Q5VUA4 2279 aa16.79■□□□□ 0.28
CCDC113-203ENST00000561517 PVALEFA0A1B0GWK0 134 aa16.79■□□□□ 0.28
CCDC113-203ENST00000561517 H7C4K7 107 aa16.79■□□□□ 0.28
CCDC113-203ENST00000561517 EIF3DO15371 548 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCDC113-203ENST00000561517 ACTN4O43707 911 aaKnown RBP16.79■□□□□ 0.28
CCDC113-203ENST00000561517 LDHAP00338 332 aaKnown RBP16.79■□□□□ 0.28
CCDC113-203ENST00000561517 HNRNPA1P09651 372 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCDC113-203ENST00000561517 HOXA9P31269 272 aa16.79■□□□□ 0.28
CCDC113-203ENST00000561517 UVSSAQ2YD98 709 aa16.79■□□□□ 0.28
CCDC113-203ENST00000561517 FAM26FQ5R3K3 315 aa16.79■□□□□ 0.28
CCDC113-203ENST00000561517 RTL10Q7L3V2 364 aa16.79■□□□□ 0.28
CCDC113-203ENST00000561517 PLCD3Q8N3E9 789 aa16.79■□□□□ 0.28
CCDC113-203ENST00000561517 TDRD5Q8NAT2 981 aaKnown RBP16.79■□□□□ 0.28
CCDC113-203ENST00000561517 ZSWIM2Q8NEG5 633 aa16.79■□□□□ 0.28
CCDC113-203ENST00000561517 APPL2Q8NEU8 664 aa16.79■□□□□ 0.28
CCDC113-203ENST00000561517 ZNF507Q8TCN5 953 aa16.79■□□□□ 0.28
CCDC113-203ENST00000561517 SCAND2PQ9GZW5 306 aaPredicted RBP16.79■□□□□ 0.28
CCDC113-203ENST00000561517 SERTAD1Q9UHV2 236 aa16.79■□□□□ 0.28
CCDC113-203ENST00000561517 HPSEQ9Y251 543 aa16.79■□□□□ 0.28
CCDC113-203ENST00000561517 TSC2P49815 1807 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 FAM237AA0A1B0GTK4 181 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 ANO9A1A5B4 782 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 FAM86C2PA6NEL3 165 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 PIRO00625 290 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 PPEF2O14830 753 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 KIAA0391O15091 583 aaKnown RBP16.78■□□□□ 0.28
CCDC113-203ENST00000561517 ABLIM3O94929 683 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 IL18RAPO95256 599 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 C8AP07357 584 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 POU2F2P09086 479 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 PFKFB1P16118 471 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 PAX3P23760 479 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 CASP1P29466 404 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 HOXD13P35453 343 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 AFMP43652 599 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 ROR1Q01973 937 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 LIN9Q5TKA1 542 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 C9orf57Q5W0N0 161 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 OTOP3Q7RTS5 596 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 NT5DC4Q86YG4 428 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 BRSK2Q8IWQ3 736 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 EFCAB13Q8IY85 973 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 CEP57L1Q8IYX8 460 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 ZNF461Q8TAF7 563 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 EDAQ92838 391 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 SAAL1Q96ER3 474 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 CBWD1Q9BRT8 395 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 FAM213AQ9BRX8 229 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 BLZF1Q9H2G9 400 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 USP25Q9UHP3 1055 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 FBXL5Q9UKA1 691 aa16.78■□□□□ 0.28
CCDC113-203ENST00000561517 CLUHO75153 1309 aa16.77■□□□□ 0.28
CCDC113-203ENST00000561517 A0A1B0GVL5 298 aa16.77■□□□□ 0.28
CCDC113-203ENST00000561517 PRR33A8MZF0 331 aa16.77■□□□□ 0.28
CCDC113-203ENST00000561517 EXTL3O43909 919 aa16.77■□□□□ 0.28
CCDC113-203ENST00000561517 WNT7BP56706 349 aa16.77■□□□□ 0.28
CCDC113-203ENST00000561517 LILRA4P59901 499 aa16.77■□□□□ 0.28
CCDC113-203ENST00000561517 ZXDAP98168 799 aa16.77■□□□□ 0.28
CCDC113-203ENST00000561517 CUL4BQ13620 913 aa16.77■□□□□ 0.28
CCDC113-203ENST00000561517 PTPN21Q16825 1174 aa16.77■□□□□ 0.28
CCDC113-203ENST00000561517 CTXN3Q4LDR2 81 aa16.77■□□□□ 0.28
CCDC113-203ENST00000561517 PPM1LQ5SGD2 360 aa16.77■□□□□ 0.28
CCDC113-203ENST00000561517 ZNF280DQ6N043 979 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms