RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 UBQLN1Q9UMX0 589 aaKnown RBP11.23□□□□□ -0.61
SHMT2-224ENST00000556737 PCDHB8Q9UN66 801 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 PCDHA7Q9UN72 937 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 WDR27A2RRH5 827 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 TMEM221A6NGB7 291 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 M0QZQ0 153 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 M0R296 226 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 GCNT3O95395 438 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 POU2F2P09086 479 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 HNRNPA1P09651 372 aaKnown RBP eCLIP11.22□□□□□ -0.61
SHMT2-224ENST00000556737 IDEP14735 1019 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 MCM4P33991 863 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 ACOT2P49753 483 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 EHHADHQ08426 723 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 SIGLEC14Q08ET2 396 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 ALCAMQ13740 583 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 LIN9Q5TKA1 542 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 SPATA1Q5VX52 437 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 RESP18Q5W5W9 173 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 ATL3Q6DD88 541 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 ADALQ6DHV7 355 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 CNNM4Q6P4Q7 775 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 EFCAB13Q8IY85 973 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 ZSWIM2Q8NEG5 633 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 SLC7A14Q8TBB6 771 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 HPS3Q969F9 1004 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 DOCK6Q96HP0 2047 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 ACCSQ96QU6 501 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 MYADMQ96S97 322 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 TSPAN18Q96SJ8 248 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 FBXL5Q9UKA1 691 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 SORCS3Q9UPU3 1222 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 DERAQ9Y315 318 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 NUB1Q9Y5A7 615 aa11.22□□□□□ -0.61
SHMT2-224ENST00000556737 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-224ENST00000556737 SCN1AP35498 2009 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 ANO9A1A5B4 782 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 SPTLC1O15269 473 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 ABLIM3O94929 683 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 HOXD13P35453 343 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 MTMR3Q13615 1198 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 TMEM132DQ14C87 1099 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 PPM1LQ5SGD2 360 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 SLFN12LQ6IEE8 588 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 OTOP3Q7RTS5 596 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 BMP8AQ7Z5Y6 402 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 CD302Q8IX05 232 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 CCDC65Q8IXS2 484 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 POMGNT1Q8WZA1 660 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 ASB7Q9H672 318 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 EPS15L1Q9UBC2 864 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 LIMD1Q9UGP4 676 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 C2CD2Q9Y426 696 aa11.21□□□□□ -0.61
SHMT2-224ENST00000556737 WDFY4Q6ZS81 3184 aa11.21□□□□□ -0.62
SHMT2-224ENST00000556737 ARHGEF37A1IGU5 675 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 H7C4K7 107 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 CCL16O15467 120 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 XPOTO43592 962 aaKnown RBP11.2□□□□□ -0.62
SHMT2-224ENST00000556737 PRPF6O94906 941 aaKnown RBP11.2□□□□□ -0.62
SHMT2-224ENST00000556737 VNN2O95498 520 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 CASP1P29466 404 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 ME1P48163 572 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 NTHL1P78549 312 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 POU5F1Q01860 360 aaKnown RBP11.2□□□□□ -0.62
SHMT2-224ENST00000556737 C9orf57Q5W0N0 161 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 ZNF280DQ6N043 979 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 GET4Q7L5D6 327 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-224ENST00000556737 EPM2AIP1Q7L775 607 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-224ENST00000556737 GRASPQ7Z6J2 395 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-224ENST00000556737 BRSK2Q8IWQ3 736 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 IQUBQ8NA54 791 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 BEST2Q8NFU1 509 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 ACSF2Q96CM8 615 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-224ENST00000556737 FAM212AQ96EL1 285 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 SAAL1Q96ER3 474 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 GBP4Q96PP9 640 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 C7orf25Q9BPX7 421 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 CBWD1Q9BRT8 395 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 FAM213AQ9BRX8 229 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 MAGEF1Q9HAY2 307 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 PIDD1Q9HB75 910 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 HCFC1R1Q9NWW0 138 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 RCOR1Q9UKL0 485 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 CFAP45Q9UL16 551 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 EXOC7Q9UPT5 735 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 HCN4Q9Y3Q4 1203 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 PCDHB13Q9Y5F0 798 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 ATP6V1DQ9Y5K8 247 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 MUC6Q6W4X9 2439 aa11.2□□□□□ -0.62
SHMT2-224ENST00000556737 PIRO00625 290 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 EIF3DO15371 548 aaKnown RBP eCLIP11.19□□□□□ -0.62
SHMT2-224ENST00000556737 POLR2DO15514 142 aaKnown RBP11.19□□□□□ -0.62
SHMT2-224ENST00000556737 ACTN4O43707 911 aaKnown RBP11.19□□□□□ -0.62
SHMT2-224ENST00000556737 OAZ2O95190 189 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 SEC24AO95486 1093 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 PDGFBP01127 241 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-224ENST00000556737 ATF2P15336 505 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 GARTP22102 1010 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 GBP2P32456 591 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms