RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CTXN3Q4LDR2 81 aa15.31■□□□□ 0.04
ACTN1-219ENST00000556432 STPG1Q5TH74 334 aa15.31■□□□□ 0.04
ACTN1-219ENST00000556432 CD300LGQ6UXG3 332 aa15.31■□□□□ 0.04
ACTN1-219ENST00000556432 LEMD2Q8NC56 503 aa15.31■□□□□ 0.04
ACTN1-219ENST00000556432 TTC8Q8TAM2 541 aa15.31■□□□□ 0.04
ACTN1-219ENST00000556432 TTC12Q9H892 705 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-219ENST00000556432 GJB4Q9NTQ9 266 aa15.31■□□□□ 0.04
ACTN1-219ENST00000556432 NUB1Q9Y5A7 615 aa15.31■□□□□ 0.04
ACTN1-219ENST00000556432 FAM205CA6NFA0 338 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 PODXLO00592 558 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 NCANO14594 1321 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 CDKL5O76039 1030 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 PAPSS2O95340 614 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-219ENST00000556432 PROS1P07225 676 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 CCDC192P0DO97 292 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 EARS2Q5JPH6 523 aaKnown RBP15.3■□□□□ 0.04
ACTN1-219ENST00000556432 DGKKQ5KSL6 1271 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 TPGS2Q68CL5 300 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 ZFYVE26Q68DK2 2539 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 RUFY3Q7L099 469 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 WDR5BQ86VZ2 330 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 BSNDQ8WZ55 320 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 E2F7Q96AV8 911 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 ZNF274Q96GC6 653 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-219ENST00000556432 RXFP3Q9NSD7 469 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 C2orf42Q9NWW7 574 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 CEP72Q9P209 647 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 FBXL5Q9UKA1 691 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 CYP46A1Q9Y6A2 500 aa15.3■□□□□ 0.04
ACTN1-219ENST00000556432 SMIM28A0A1B0GU29 152 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 SPECC1L-ADORA2AF8WAN1 911 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 DPYSL4O14531 572 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 SYN3O14994 580 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 RPP40O75818 363 aaKnown RBP15.29■□□□□ 0.04
ACTN1-219ENST00000556432 ZNF806P0C7X5 589 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 CPB1P15086 417 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 CTHP32929 405 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 PXNP49023 591 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-219ENST00000556432 OSTNP61366 133 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 PON2Q15165 354 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 ATF7IP2Q5U623 682 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 ZNF280DQ6N043 979 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 PSAPL1Q6NUJ1 521 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 CACNA2D4Q7Z3S7 1137 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 GPIHBP1Q8IV16 184 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 KIFC3Q9BVG8 833 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 CCDC94Q9BW85 323 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-219ENST00000556432 CCDC113Q9H0I3 377 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 SMOC1Q9H4F8 434 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 TRPV4Q9HBA0 871 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 BRMS1Q9HCU9 246 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 TOPORSQ9NS56 1045 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-219ENST00000556432 SLC38A7Q9NVC3 462 aa15.29■□□□□ 0.04
ACTN1-219ENST00000556432 ARHGEF35A5YM69 484 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 ARNTLO00327 626 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 CHADO15335 359 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 NEMFO60524 1076 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 MOSPD3O75425 235 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 KCNK5O95279 499 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 EDN1P05305 212 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 XRCC6P12956 609 aaKnown RBP eCLIP15.28■□□□□ 0.04
ACTN1-219ENST00000556432 HOXC13P31276 330 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 NAMPTP43490 491 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 MLLT6P55198 1093 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-219ENST00000556432 SOX4Q06945 474 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-219ENST00000556432 NR5A1Q13285 461 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 PPP2R5AQ15172 486 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 TXNDC11Q6PKC3 985 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 UNQ6494/PRO21346Q6UXR6 183 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 HAUS6Q7Z4H7 955 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 KBTBD6Q86V97 674 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 RALGPS2Q86X27 583 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-219ENST00000556432 SHKBP1Q8TBC3 707 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 RSPRY1Q96DX4 576 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 LOXL4Q96JB6 756 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 IFT74Q96LB3 600 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 GPR88Q9GZN0 384 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 AFF4Q9UHB7 1163 aaKnown RBP15.28■□□□□ 0.04
ACTN1-219ENST00000556432 IGF2RP11717 2491 aa15.28■□□□□ 0.04
ACTN1-219ENST00000556432 GREB1Q4ZG55 1949 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 ANKRD11Q6UB99 2663 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-219ENST00000556432 A0A1W2PRU2 124 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 MYBPHLA2RUH7 354 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 C1QTNF9BB2RNN3 333 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 TM4SF5O14894 197 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 DTNBO60941 627 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 EPN2O95208 641 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 C1QTNF9P0C862 333 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 MCM4P33991 863 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 KRT2P35908 639 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 EFNA5P52803 228 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 RNF43Q68DV7 783 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 PADI6Q6TGC4 694 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 GAB3Q8WWW8 586 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 ZFYVE19Q96K21 471 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 GTSE1Q9NYZ3 720 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 ZMIZ1Q9ULJ6 1067 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 YIPF1Q9Y548 306 aa15.27■□□□□ 0.04
ACTN1-219ENST00000556432 PDCD11Q14690 1871 aaKnown RBP15.27■□□□□ 0.03
ACTN1-219ENST00000556432 EXTL3O43909 919 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms