RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 FSCBQ5H9T9 825 aa15.85■□□□□ 0.13
ARHGEF40-207ENST00000556399 MXRA8Q9BRK3 442 aa15.85■□□□□ 0.13
ARHGEF40-207ENST00000556399 TRIM56Q9BRZ2 755 aaKnown RBP15.85■□□□□ 0.13
ARHGEF40-207ENST00000556399 MARCOQ9UEW3 520 aaPredicted RBP15.85■□□□□ 0.13
ARHGEF40-207ENST00000556399 NAALADL1Q9UQQ1 740 aa15.85■□□□□ 0.13
ARHGEF40-207ENST00000556399 CLEC11AQ9Y240 323 aa15.85■□□□□ 0.13
ARHGEF40-207ENST00000556399 BCL9O00512 1426 aa15.85■□□□□ 0.13
ARHGEF40-207ENST00000556399 NFAT5O94916 1531 aa15.85■□□□□ 0.13
ARHGEF40-207ENST00000556399 UBR1Q8IWV7 1749 aa15.85■□□□□ 0.13
ARHGEF40-207ENST00000556399 GOLGA8QA0A0J9YX86 632 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 GOLGA8OA6NCC3 632 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 GOLGA8NF8WBI6 632 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 OPLAHO14841 1288 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 VHLP40337 213 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 CDH6P55285 790 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 NFX1Q12986 1120 aaKnown RBP15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 PTK7Q13308 1070 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 HIC1Q14526 733 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 SPATA31A1Q5TZJ5 1347 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 C1orf228Q6PIY5 440 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 EEPD1Q7L9B9 569 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 SESTD1Q86VW0 696 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 CBWD2Q8IUF1 395 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 ABTB1Q969K4 478 aaPredicted RBP15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 NSL1Q96IY1 281 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 ACAP3Q96P50 834 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 FAM96AQ9H5X1 160 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 STK32BQ9NY57 414 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 CREB3O43889 395 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 HLA-DRAP01903 254 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 MMP10P09238 476 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 KRT3P12035 628 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 DRD4P21917 467 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 CNGA1P29973 690 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 BCAR1P56945 870 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 GEMIN4P57678 1058 aaKnown RBP15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 NAF1Q96HR8 494 aaKnown RBP15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 VPS11Q9H270 941 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 FIS1Q9Y3D6 152 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 B2RBV5 119 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 RBAK-RBAKDNI3L0D1 243 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 LCA5LO95447 670 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 RARAP10276 462 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 ALDH5A1P51649 535 aaPredicted RBP15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 SNRPFP62306 86 aaKnown RBP15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 HGSNATQ68CP4 663 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 SPOPLQ6IQ16 392 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 KRT80Q6KB66 452 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 AADACL2Q6P093 401 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 RASSF3Q86WH2 238 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 ZNF677Q86XU0 584 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 OLFM3Q96PB7 478 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 CRAMP1Q96RY5 1269 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 ATXN2Q99700 1313 aaKnown RBP15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 CNTNAP4Q9C0A0 1308 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 HAS1Q92839 578 aa15.84■□□□□ 0.13
ARHGEF40-207ENST00000556399 M0QYV0 167 aa15.83■□□□□ 0.13
ARHGEF40-207ENST00000556399 ZNF200P98182 395 aaPredicted RBP15.83■□□□□ 0.13
ARHGEF40-207ENST00000556399 KIFC3Q9BVG8 833 aa15.83■□□□□ 0.13
ARHGEF40-207ENST00000556399 KIF9Q9HAQ2 790 aa15.83■□□□□ 0.13
ARHGEF40-207ENST00000556399 RNF146Q9NTX7 359 aa15.83■□□□□ 0.13
ARHGEF40-207ENST00000556399 COL5A2P05997 1499 aaPredicted RBP15.83■□□□□ 0.13
ARHGEF40-207ENST00000556399 GSTA2P09210 222 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 PAX7P23759 505 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 KCNA1Q09470 495 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 QPCTQ16769 361 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 RNF168Q8IYW5 571 aaPredicted RBP15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 KRT35Q92764 455 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 KCNH7Q9NS40 1196 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 TLR2O60603 784 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 CPA2P48052 419 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 GPC3P51654 580 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 RCN1Q15293 331 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 MAPK6Q16659 721 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 FAM102AQ5T9C2 384 aaPredicted RBP15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 FEZF2Q8TBJ5 459 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 NSUN6Q8TEA1 469 aaKnown RBP15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 THTPAQ9BU02 230 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 AKT3Q9Y243 479 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 AFDNP55196 1824 aaKnown RBP15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 PSTPIP1O43586 416 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 MX2P20592 715 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 PIGHQ14442 188 aaPredicted RBP15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 LRRC36Q1X8D7 754 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 SLC30A10Q6XR72 485 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 IRF2BP2Q7Z5L9 587 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 MID2Q9UJV3 735 aa15.83■□□□□ 0.12
ARHGEF40-207ENST00000556399 RRM1P23921 792 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 FLT3P36888 993 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 CBWD6Q4V339 395 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 CBWD3Q5JTY5 395 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 CBWD5Q5RIA9 395 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 HEY2Q9UBP5 337 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 F5H423 210 aaPredicted RBP15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 H3BRJ5 948 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 NFIAQ12857 509 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 DNAL1Q4LDG9 190 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 RABGAP1LQ5R372 815 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 TRIML2Q8N7C3 387 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 ICA1LQ8NDH6 482 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms