RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 WDR46O15213 610 aaKnown RBP12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 KCNN4O15554 427 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 UBOX5O94941 541 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 FSBPO95073 299 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 SP8Q8IXZ3 490 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 OSGEPQ9NPF4 335 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 F5H423 210 aaPredicted RBP12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 DGAT1O75907 488 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 ACADSP16219 412 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 CASP4P49662 377 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 ACAD10Q6JQN1 1059 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 MYLK4Q86YV6 388 aaPredicted RBP12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 APLFQ8IW19 511 aaPredicted RBP12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 ATP8B4Q8TF62 1192 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 CDC42EP4Q9H3Q1 356 aaKnown RBP12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 DHX35Q9H5Z1 703 aaKnown RBP12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 RAB6BQ9NRW1 208 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 WDR35Q9P2L0 1181 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 SUN2Q9UH99 717 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 PREX1Q8TCU6 1659 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 RNF103-CHMP3A0A140T963 221 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 SPDYE16A6NNV3 312 aaPredicted RBP12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 SERPINB9P50453 376 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 GEMIN4P57678 1058 aaKnown RBP12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 KCNMA1Q12791 1236 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 EFTUD2Q15029 972 aaKnown RBP eCLIP12.86□□□□□ -0.351e-6■■■■□ 21.1
NPC1L1-204ENST00000546276 CNGA3Q16281 694 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 SPDYE2Q495Y8 402 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 GRAMD4Q6IC98 578 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 TMC3Q7Z5M5 1100 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 EHD4Q9H223 541 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 ZFATQ9P243 1243 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 MYO3BQ8WXR4 1341 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 ITGA4P13612 1032 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 PHKA2P46019 1235 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 LRRC36Q1X8D7 754 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 FAM47CQ5HY64 1035 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 METTL23Q86XA0 190 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 EXT2Q93063 718 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 CNOT7Q9UIV1 285 aaKnown RBP12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 PRR12Q9ULL5 1215 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 INPP5FQ9Y2H2 1132 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 PDE2AO00408 941 aaPredicted RBP12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 KCNQ2O43526 872 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 APRTP07741 180 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 ACOT2P49753 483 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 GIT2Q14161 759 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 ADGRA1Q86SQ6 560 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 KCNK16Q96T55 309 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 RIT2Q99578 217 aa12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 TRPC5Q9UL62 973 aaPredicted RBP12.86□□□□□ -0.35
NPC1L1-204ENST00000546276 RSPH10B2B2RC85 870 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 KLHL2O95198 593 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 SNRPAP09012 282 aaKnown RBP12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 MMP10P09238 476 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 RSPH10BP0C881 870 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 PAPOLAP51003 745 aaKnown RBP12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 NLRP9Q7RTR0 991 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 CNPY4Q8N129 248 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 GIPC2Q8TF65 315 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 KRT82Q9NSB4 513 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 HAO1Q9UJM8 370 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 L3MBTL1Q9Y468 752 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 H3BRJ5 948 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 MSH4O15457 936 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 HLA-DRAP01903 254 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 WEE2P0C1S8 567 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 SUPT20HL1Q3ZLR7 823 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 TTMPQ5BVD1 217 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 C16orf87Q6PH81 154 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 MOXD1Q6UVY6 613 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 PIK3R2O00459 728 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 PMLP29590 882 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 CIITAP33076 1130 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 CTCFP49711 727 aaPredicted RBP12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 CCNA1P78396 465 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 AP1B1Q10567 949 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 NCOA4Q13772 614 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 EPC2Q52LR7 807 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 SYCP2LQ5T4T6 812 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 PPIL6Q8IXY8 311 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 ATG4AQ8WYN0 398 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 AKAP3O75969 853 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 KRT4P19013 534 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 TNFRSF8P28908 595 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 NFX1Q12986 1120 aaKnown RBP12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 FEZF2Q8TBJ5 459 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 SEMA4AQ9H3S1 761 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 PCMTD2Q9NV79 361 aa12.85□□□□□ -0.35
NPC1L1-204ENST00000546276 PXDNQ92626 1479 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 GTPBP10A4D1E9 387 aaKnown RBP12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 GZMAP12544 262 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 EFNA5P52803 228 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 OCA2Q04671 838 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 YWHAHQ04917 246 aaPredicted RBP12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 MAPRE2Q15555 327 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 TRIP10Q15642 601 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 SMAD1Q15797 465 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms