RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 RAPGEF1Q13905 1077 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 FIGNQ5HY92 759 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 NOMO2Q5JPE7 1267 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 FAM117BQ6P1L5 589 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 ZNF280BQ86YH2 543 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 RPUSD2Q8IZ73 545 aaKnown RBP16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 PPM1KQ8N3J5 372 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 CASD1Q96PB1 797 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 UBN1Q9NPG3 1134 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 IMPACTQ9P2X3 320 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 CAPN11Q9UMQ6 739 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 COL4A6Q14031 1691 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 ABHD14A-ACY1A0A1B0GW23 586 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 ANO9A1A5B4 782 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 F8W810 466 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 SPTLC1O15269 473 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 INPPL1O15357 1258 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 DDHD2O94830 711 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 PPIGQ13427 754 aaKnown RBP eCLIP16.84■□□□□ 0.294e-6■■■■□ 24.8
SFSWAP-206ENST00000537582 ARHGAP44Q17R89 818 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 ZNF699Q32M78 642 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 PAN2Q504Q3 1202 aaKnown RBP16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 SCARA5Q6ZMJ2 495 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 NPAS4Q8IUM7 802 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 NT5C1BQ96P26 610 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.84■□□□□ 0.291e-8■□□□□ 10.6
SFSWAP-206ENST00000537582 NUP58Q9BVL2 599 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 GPR88Q9GZN0 384 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 TBC1D13Q9NVG8 400 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 CXXC1Q9P0U4 656 aaPredicted RBP16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 CEP72Q9P209 647 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 TTC3P53804 2025 aa16.84■□□□□ 0.29
SFSWAP-206ENST00000537582 LRRC53A6NM62 1247 aa16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 AKR1B15C9JRZ8 316 aaPredicted RBP16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 PIRO00625 290 aa16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 PTMAP06454 111 aaKnown RBP16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 PFKMP08237 780 aa16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 KRT9P35527 623 aa16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 CLCNKBP51801 687 aa16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 RBP5P82980 135 aa16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 GRIK3Q13003 919 aa16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 WDR44Q5JSH3 913 aa16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 TMEM240Q5SV17 173 aa16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 CACNA2D4Q7Z3S7 1137 aa16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 C3orf58Q8NDZ4 430 aa16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 HPDLQ96IR7 371 aa16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 ZNF830Q96NB3 372 aaPredicted RBP16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 NXF1Q9UBU9 619 aaKnown RBP16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 DNAJB4Q9UDY4 337 aa16.83■□□□□ 0.28
SFSWAP-206ENST00000537582 A0A1W2PQJ5 194 aa16.82■□□□□ 0.28
SFSWAP-206ENST00000537582 TBKBP1A7MCY6 615 aa16.82■□□□□ 0.28
SFSWAP-206ENST00000537582 ZBBXA8MT70 800 aa16.82■□□□□ 0.28
SFSWAP-206ENST00000537582 CYP3A5P20815 502 aa16.82■□□□□ 0.28
SFSWAP-206ENST00000537582 RAP1GAPP47736 663 aa16.82■□□□□ 0.28
SFSWAP-206ENST00000537582 JAM2P57087 298 aa16.82■□□□□ 0.28
SFSWAP-206ENST00000537582 TRIM14Q14142 442 aa16.82■□□□□ 0.28
SFSWAP-206ENST00000537582 DRAP1Q14919 205 aaPredicted RBP16.82■□□□□ 0.28
SFSWAP-206ENST00000537582 SGSM1Q2NKQ1 1148 aa16.82■□□□□ 0.28
SFSWAP-206ENST00000537582 PDXDC1Q6P996 788 aa16.82■□□□□ 0.28
SFSWAP-206ENST00000537582 ABI1Q8IZP0 508 aa16.82■□□□□ 0.28
SFSWAP-206ENST00000537582 SDCBP2Q9H190 292 aa16.82■□□□□ 0.28
SFSWAP-206ENST00000537582 SLC38A7Q9NVC3 462 aa16.82■□□□□ 0.28
SFSWAP-206ENST00000537582 LUC7L2Q9Y383 392 aaKnown RBP16.82■□□□□ 0.28
SFSWAP-206ENST00000537582 PODXLO00592 558 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 XPOTO43592 962 aaKnown RBP16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 ZC3H11AO75152 810 aaKnown RBP eCLIP16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 CALCAP01258 141 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 FGBP02675 491 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 LRPAP1P30533 357 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 ASPAP45381 313 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 ZBED6P86452 979 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 CUL2Q13617 745 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 WDR72Q3MJ13 1102 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 URGCPQ8TCY9 931 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 HASPINQ8TF76 798 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 TOP1MTQ969P6 601 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 TSPAN18Q96SJ8 248 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 IMPG2Q9BZV3 1241 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 NIF3L1Q9GZT8 377 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 SMYD3Q9H7B4 428 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 ABHD10Q9NUJ1 306 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 F8VZ95 297 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 FOXN3O00409 490 aaPredicted RBP16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 DGKIO75912 1065 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 BAIAP3O94812 1187 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 AMHP03971 560 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 ITGB1P05556 798 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 WEE2P0C1S8 567 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 CDH8P55286 799 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 DSC1Q08554 894 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 TUSC3Q13454 348 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 CD300LGQ6UXG3 332 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 KCNF1Q9H3M0 494 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 FBXL5Q9UKA1 691 aa16.81■□□□□ 0.28
SFSWAP-206ENST00000537582 SCN1AP35498 2009 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 PTPRSQ13332 1948 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 I3L4J1 428 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 ATICP31939 592 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 PBX3P40426 434 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 ARID5AQ03989 594 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms