RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 HYIQ5T013 277 aa16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 SLC8B1Q6J4K2 584 aa16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 PARM1Q6UWI2 310 aa16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 RSPO2Q6UXX9 243 aaPredicted RBP16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 PACS2Q86VP3 889 aa16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 ITFG1Q8TB96 612 aa16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 SHDQ96IW2 340 aa16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 CDK5RAP3Q96JB5 506 aa16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 NPDC1Q9NQX5 325 aaPredicted RBP16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 HCFC1R1Q9NWW0 138 aa16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 KCND2Q9NZV8 630 aa16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 ANKFY1Q9P2R3 1169 aa16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 NUB1Q9Y5A7 615 aa16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 SPTBN4Q9H254 2564 aa16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 PTPRZ1P23471 2315 aaPredicted RBP16.62■□□□□ 0.25
DEPDC7-204ENST00000532078 DMDP11532 3685 aa16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 MYH11P35749 1972 aa16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 H3BQV1 296 aa16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 H7C4K7 107 aa16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 SYN3O14994 580 aa16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 RPL9P32969 192 aaKnown RBP16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 ROR1Q01973 937 aa16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 RAD51AP2Q09MP3 1159 aa16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 NPAS3Q8IXF0 933 aa16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 ST13P5Q8NFI4 369 aaPredicted RBP16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 ZMAT2Q96NC0 199 aaKnown RBP16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 NTPCRQ9BSD7 190 aaKnown RBP16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 DNMT3BQ9UBC3 853 aaKnown RBP16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 SIT1Q9Y3P8 196 aa16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 GVINP1Q7Z2Y8 2422 aa16.61■□□□□ 0.25
DEPDC7-204ENST00000532078 ZNF292O60281 2723 aa16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 VWA3AA6NCI4 1184 aa16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 GOLGA8CPA6NN73 597 aa16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 SFI1A8K8P3 1242 aa16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 H0YCG3 227 aa16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 PRRG1O14668 218 aa16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 LRG1P02750 347 aa16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 MAPTP10636 758 aaKnown RBP16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 ELF1P32519 619 aa16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 ARL6IP4Q66PJ3 421 aaKnown RBP16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 ZPBP2Q6X784 338 aa16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 SYT2Q8N9I0 419 aaPredicted RBP16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 TMEM161BQ8NDZ6 487 aa16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 PJA1Q8NG27 643 aa16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 ZNF461Q8TAF7 563 aa16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 C18orf25Q96B23 403 aaPredicted RBP16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 PNMA5Q96PV4 448 aa16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 RPP25Q9BUL9 199 aaKnown RBP16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 MRPS23Q9Y3D9 190 aaKnown RBP16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 PDCD11Q14690 1871 aaKnown RBP16.6■□□□□ 0.25
DEPDC7-204ENST00000532078 ARHGEF37A1IGU5 675 aa16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 WDR27A2RRH5 827 aa16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 ABLIM3O94929 683 aa16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 RHOP08100 348 aa16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 STARD6P59095 220 aa16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 GPC5P78333 572 aa16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 PFKPQ01813 784 aa16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 SPECC1Q5M775 1068 aa16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 ING5Q8WYH8 240 aa16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 TMX3Q96JJ7 454 aa16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 ZBTB45Q96K62 511 aaPredicted RBP16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 SUSD3Q96L08 255 aa16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 KXD1Q9BQD3 176 aa16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 AVENQ9NQS1 362 aaPredicted RBP16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 GDE1Q9NZC3 331 aa16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 LARSQ9P2J5 1176 aaKnown RBP16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.59■□□□□ 0.25
DEPDC7-204ENST00000532078 NOTCH4Q99466 2003 aa16.58■□□□□ 0.25
DEPDC7-204ENST00000532078 CLDN3O15551 220 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 SLC26A4O43511 780 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 CENPBP07199 599 aaPredicted RBP16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 DCNP07585 359 aaKnown RBP16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 PLA2G4BP0C869 781 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 ATF2P15336 505 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 GJB2P29033 226 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 MCM4P33991 863 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 MATR3P43243 847 aaKnown RBP eCLIP16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 SLC12A3P55017 1021 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 ARPP19P56211 112 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 PRKCQQ04759 706 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 MCL1Q07820 350 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 MLF2Q15773 248 aaPredicted RBP16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 CTXN3Q4LDR2 81 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 TMEM119Q4V9L6 283 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 TPGS2Q68CL5 300 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 ZNF280DQ6N043 979 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 LAPTM4BQ86VI4 370 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 TCEAL8Q8IYN2 117 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 APPL2Q8NEU8 664 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 BICD1Q96G01 975 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 AK8Q96MA6 479 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 PLIN2Q99541 437 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 FOXQ1Q9C009 403 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 SEMA4AQ9H3S1 761 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 UPF2Q9HAU5 1272 aaKnown RBP16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 DLGAP2Q9P1A6 1054 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 FBXL5Q9UKA1 691 aa16.58■□□□□ 0.24
DEPDC7-204ENST00000532078 MIA3Q5JRA6 1907 aa16.57■□□□□ 0.24
DEPDC7-204ENST00000532078 MEFVO15553 781 aaPredicted RBP16.57■□□□□ 0.24
DEPDC7-204ENST00000532078 TBC1D4O60343 1298 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms