RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 A0A087WZ62 844 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 FAM187AA6NFU0 413 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 A6NJR5 290 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 MYO1FO00160 1098 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 SPOPO43791 374 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 FGGP02679 453 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 P4HA1P13674 534 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 CTNNA1P35221 906 aaKnown RBP15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 PEX5P50542 639 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 RWDD2BP57060 319 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 RNASE9P60153 205 aaKnown RBP15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 TFAMQ00059 246 aaKnown RBP15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 SLC7A5Q01650 507 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 GUCY2DQ02846 1103 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 GRIK4Q16099 956 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 ZNF699Q32M78 642 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 SPOPLQ6IQ16 392 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 GOLGA6L1Q8N7Z2 621 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 CD101Q93033 1021 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 FAM212AQ96EL1 285 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 FDXACB1Q9BRP7 624 aaPredicted RBP15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 ADPGKQ9BRR6 497 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 MTMR12Q9C0I1 747 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 ACP6Q9NPH0 428 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 ZHX1Q9UKY1 873 aaPredicted RBP15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 MTUS1Q9ULD2 1270 aa15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.77■□□□□ 0.11
ECHDC1-220ENST00000528402 NRCAMQ92823 1304 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 ANK1P16157 1881 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 BHMG1C9JSJ3 638 aaPredicted RBP15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 THAP12O43422 761 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 RAD51CO43502 376 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 MED7O43513 233 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 ZMYND10O75800 440 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 CALB1P05937 261 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 GLI1P08151 1106 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 STAG3L1P0CL83 205 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 OAS2P29728 719 aaKnown RBP15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 GBP1P32455 592 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 HUNKP57058 714 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 MYL6P60660 151 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 TAP1Q03518 808 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 PTP4A2Q12974 167 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 DHX34Q14147 1143 aaKnown RBP15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 AMHR2Q16671 573 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 DCAF4L1Q3SXM0 396 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 SEZ6Q53EL9 994 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 EEF1DP3Q658K8 133 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 MON1BQ7L1V2 547 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 KLHL7Q8IXQ5 586 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 MREGQ8N565 214 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 NPLOC4Q8TAT6 608 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 ZNF606Q8WXB4 792 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 RAB17Q9H0T7 212 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 VRTNQ9H8Y1 702 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 CYP3A43Q9HB55 503 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 FAM114A2Q9NRY5 505 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 ADAM22Q9P0K1 906 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 HPCAL4Q9UM19 191 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 PCDHGC3Q9UN70 934 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 CEP83Q9Y592 693 aa15.76■□□□□ 0.11
ECHDC1-220ENST00000528402 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 B4GALT5O43286 388 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 ERLIN2O94905 339 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 STAU1O95793 577 aaKnown RBP15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 PAEPP09466 180 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 EIF4BP23588 611 aaKnown RBP15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 CHRNA3P32297 505 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 NOMO3P69849 1222 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 GJC2Q5T442 439 aaPredicted RBP15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 NAA35Q5VZE5 725 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 CST9Q5W186 159 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 OLFML2BQ68BL8 750 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 SND1Q7KZF4 910 aaKnown RBP eCLIP15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 TMEM35BQ8NCS4 154 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 NLRP7Q8WX94 980 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 CYFIP2Q96F07 1278 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 TSPAN18Q96SJ8 248 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 GCOM2Q9BZD3 368 aaPredicted RBP15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 PDZD7Q9H5P4 517 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 MINDY3Q9H8M7 445 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 PLEKHA5Q9HAU0 1116 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 CISHQ9NSE2 258 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 RASAL2Q9UJF2 1139 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 DERAQ9Y315 318 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 UTP11Q9Y3A2 253 aaKnown RBP15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 C2CD2Q9Y426 696 aa15.75■□□□□ 0.11
ECHDC1-220ENST00000528402 A0A1B0GUA9 196 aa15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 SMIM35A0A1B0GVV1 85 aa15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 GPR25O00155 361 aa15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 OPA1O60313 960 aa15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 ZNF286BP0CG31 522 aa15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 AXLP30530 894 aa15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 CDH5P33151 784 aaPredicted RBP15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 MAN1A1P33908 653 aa15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 DRG2P55039 364 aaKnown RBP15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 ZNF667Q5HYK9 610 aa15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 PLEKHA7Q6IQ23 1121 aa15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 CHADLQ6NUI6 762 aa15.74■□□□□ 0.11
ECHDC1-220ENST00000528402 KIAA0319LQ8IZA0 1049 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms