RNA–Protein interactions for RNA: ENST00000520963.2

IGHV7-40-201, Transcript of immunoglobulin heavy variable 7-40 (pseudogene), humanhuman

BASIC

Gene IGHV7-40, Length 296 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV7-40-201ENST00000520963 TUBB2AQ13885 445 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 NAB2Q15742 525 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 PTPN21Q16825 1174 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 TCTN1Q2MV58 587 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 SGSM1Q2NKQ1 1148 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 ERCC6LQ2NKX8 1250 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 PHLDB3Q6NSJ2 640 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 ENOSF1Q7L5Y1 443 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 PPFIBP1Q86W92 1011 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 TMTC1Q8IUR5 882 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 RPUSD2Q8IZ73 545 aaKnown RBP8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 LRRC52Q8N7C0 313 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 BEST2Q8NFU1 509 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 HELQQ8TDG4 1101 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 ABHD8Q96I13 439 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 SCLYQ96I15 445 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 WDR24Q96S15 920 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 CRACR2AQ9BSW2 395 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 TUBB2BQ9BVA1 445 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 STK33Q9BYT3 514 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 MTMR12Q9C0I1 747 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 XYLT2Q9H1B5 865 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 CXCL16Q9H2A7 254 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 MMRN2Q9H8L6 949 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 RSAD1Q9HA92 442 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 FAM207AQ9NSI2 230 aaPredicted RBP8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 RNF19AQ9NV58 838 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 ZNF446Q9NWS9 450 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 DPP3Q9NY33 737 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 PARP2Q9UGN5 583 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 SIX4Q9UIU6 781 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 PLAGL2Q9UPG8 496 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 LUC7L2Q9Y383 392 aaKnown RBP8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 MRFAP1Q9Y605 127 aa8.56□□□□□ -1.04
IGHV7-40-201ENST00000520963 BRCA2P51587 3418 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 ARL5CA6NH57 179 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 MEIS3P2A8K0S8 358 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 PIRO00625 290 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 HOXA2O43364 376 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 ATP8B1O43520 1251 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 BAIAP3O94812 1187 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 ZRANB2O95218 330 aaKnown RBP eCLIP8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 CST3P01034 146 aaPredicted RBP8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 FAM163BP0C2L3 166 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 ACTN1P12814 892 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 RAG1P15918 1043 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 CASQ1P31415 396 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 FAM193AP78312 1265 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 RBP5P82980 135 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 CBX1P83916 185 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 TFAMQ00059 246 aaKnown RBP8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 GRIK3Q13003 919 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 BIRC3Q13489 604 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 MTF1Q14872 753 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 MEA1Q16626 185 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 LMBRD2Q68DH5 695 aaPredicted RBP8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 IQCEQ6IPM2 695 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 PDXDC1Q6P996 788 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 ZNF662Q6ZS27 426 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 FMNL3Q8IVF7 1028 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 TMEM199Q8N511 208 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 UBR7Q8N806 425 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 OR8K1Q8NGG5 319 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 FAM212AQ96EL1 285 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 KIF12Q96FN5 646 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 NT5C1BQ96P26 610 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 GAD1Q99259 594 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 HTATIP2Q9BUP3 242 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 APOBEC3GQ9HC16 384 aaKnown RBP8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 ABHD10Q9NUJ1 306 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 AIPL1Q9NZN9 384 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 KANSL3Q9P2N6 904 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 PRDM4Q9UKN5 801 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 CNTN6Q9UQ52 1028 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 FHOD1Q9Y613 1164 aa8.55□□□□□ -1.04
IGHV7-40-201ENST00000520963 CITO14578 2027 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 SOWAHDA6NJG2 315 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 PHACTR2O75167 634 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 LRRN2O75325 713 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 URI1O94763 535 aaPredicted RBP8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 THP07101 528 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 TBXAS1P24557 533 aaPredicted RBP8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 RPL9P32969 192 aaKnown RBP8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 KRT9P35527 623 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 MLH1P40692 756 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 PNPLA4P41247 253 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 PRKCIP41743 596 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 ARHGAP25P42331 645 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 PIK3CAP42336 1068 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 AARSP49588 968 aaKnown RBP eCLIP8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 CLCN6P51797 869 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 POLR2FP61218 127 aaKnown RBP8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 GNG11P61952 73 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 NOP14P78316 857 aaKnown RBP8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 DSC1Q08554 894 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 TRPC3Q13507 836 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 IKBKEQ14164 716 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 WDR44Q5JSH3 913 aa8.54□□□□□ -1.04
IGHV7-40-201ENST00000520963 CLLU1OSQ5K130 101 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms