RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 LCA5LO95447 670 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 APOA4P06727 396 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 FCGR1AP12314 374 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 VCAM1P19320 739 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 GNA15P30679 374 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 KCNQ4P56696 695 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 KRT76Q01546 638 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 LACTB2Q53H82 288 aaPredicted RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 ERMARDQ5T6L9 678 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 KLHDC7AQ5VTJ3 777 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 CLEC4GQ6UXB4 293 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 TSHZ1Q6ZSZ6 1077 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 KCTD17Q8N5Z5 321 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 FAM149B1Q96BN6 582 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 RMND5BQ96G75 393 aaPredicted RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 LACRTQ9GZZ8 138 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 CDC42EP4Q9H3Q1 356 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 NSMCE4AQ9NXX6 385 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 SH3GLB1Q9Y371 365 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 ARIH1Q9Y4X5 557 aaPredicted RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 IQSEC2Q5JU85 1478 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 ZNF609O15014 1411 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 LRRC7Q96NW7 1537 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 SNX3O60493 162 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 PTENP60484 403 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 STK4Q13043 487 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 LBRQ14739 615 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 UBE2SQ16763 222 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 UGP2Q16851 508 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 USP17L2Q6R6M4 530 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 ZNF662Q6ZS27 426 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 ZNF507Q8TCN5 953 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 EZH1Q92800 747 aaPredicted RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 CDHR1Q96JP9 859 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 CEP170P1Q96L14 293 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 SENP7Q9BQF6 1050 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 MKNK1Q9BUB5 465 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 MRPS26Q9BYN8 205 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 DHX36Q9H2U1 1008 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 KANSL2Q9H9L4 492 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 DDX18Q9NVP1 670 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 SEPT9Q9UHD8 586 aaPredicted RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 PCDHA6Q9UN73 950 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 MYRFQ9Y2G1 1151 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 PCDHA8Q9Y5H6 950 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 OVOS2A0A0G2JMS6 1433 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 GOLGA8IPA6NC78 632 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 GOLGA8JA6NMD2 632 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 EIF3DO15371 548 aaKnown RBP eCLIP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 SNX2O60749 519 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 SHOX2O60902 331 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 VIL1P09327 827 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 TRIM49P0CI25 452 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 TRIM49CP0CI26 452 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 CD58P19256 250 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 PMLP29590 882 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 RPL5P46777 297 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 FMO5P49326 533 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 CHN2P52757 468 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 BLVRAP53004 296 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 XIAPP98170 497 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 CTTNQ14247 550 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 CAPRIN1Q14444 709 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 MTFR1Q15390 333 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 CEP78Q5JTW2 689 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 IYDQ6PHW0 289 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 MIGA2Q7L4E1 593 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 RYBPQ8N488 228 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 TTC39CQ8N584 583 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 NDNQ99608 321 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 C1orf50Q9BV19 199 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 MYLK2Q9H1R3 596 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 PICK1Q9NRD5 415 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 PCMTD2Q9NV79 361 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 NAGPAQ9UK23 515 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 PNPLA7Q6ZV29 1317 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 A0A087WXM4 84 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 RIPK2O43353 540 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 SRGAP2CP0DJJ0 459 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 EPHB2P29323 1055 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 SOX6P35712 828 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 NUDT2P50583 147 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 PRELPP51888 382 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 AP3M2P53677 418 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 MTTPP55157 894 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 ATP1A4Q13733 1029 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 PARP6Q2NL67 630 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 SLC45A4Q5BKX6 768 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 ZC3H12BQ5HYM0 836 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 NT5DC1Q5TFE4 455 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 TMEM270Q6UE05 265 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 C1orf131Q8NDD1 294 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 ZNF398Q8TD17 642 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 NRDE2Q9H7Z3 1164 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 NGRNQ9NPE2 291 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 PAK5Q9P286 719 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 STARD13Q9Y3M8 1113 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 HEY1Q9Y5J3 304 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 ARHGEF40Q8TER5 1519 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms