RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 SHROOM3Q8TF72 1996 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 TMEM150BA6NC51 233 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 ADAM12O43184 909 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 XYLBO75191 536 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 STBD1O95210 358 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 FOSP01100 380 aaPredicted RBP7.83□□□□□ -1.16
VCAN-206ENST00000505615 CEBPBP17676 345 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 HOXA6P31267 233 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 GNAQP50148 359 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 SCNN1GP51170 649 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 CREMQ03060 361 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 TRDNQ13061 729 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 GRM2Q14416 872 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 PABPC1LQ4VXU2 614 aaKnown RBP7.83□□□□□ -1.16
VCAN-206ENST00000505615 PPM1LQ5SGD2 360 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 LIN9Q5TKA1 542 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 RNF43Q68DV7 783 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 TCEAL6Q6IPX3 200 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 FOXR1Q6PIV2 292 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 HEATR3Q7Z4Q2 680 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 KSR1Q8IVT5 923 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 TCEAL3Q969E4 200 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 GTPBP3Q969Y2 492 aaKnown RBP7.83□□□□□ -1.16
VCAN-206ENST00000505615 MCRS1Q96EZ8 462 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 BBC3Q96PG8 261 aaPredicted RBP7.83□□□□□ -1.16
VCAN-206ENST00000505615 GAD1Q99259 594 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 CLSTN3Q9BQT9 956 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 MINDY3Q9H8M7 445 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 IFT122Q9HBG6 1241 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 DIAPH3Q9NSV4 1193 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 RBM12Q9NTZ6 932 aaKnown RBP7.83□□□□□ -1.16
VCAN-206ENST00000505615 GDE1Q9NZC3 331 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 RCAN3Q9UKA8 241 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 PLXNB3Q9ULL4 1909 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 MYO16Q9Y6X6 1858 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 PTPN13Q12923 2485 aa7.83□□□□□ -1.16
VCAN-206ENST00000505615 KIAA1549LQ6ZVL6 1849 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 ARL5CA6NH57 179 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 ARNTLO00327 626 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 ADAMTS3O15072 1205 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 CAPNS1P04632 268 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 RHOP08100 348 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 CYP3A4P08684 503 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 RXRAP19793 462 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 MPLP40238 635 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 MLH1P40692 756 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 ADCY7P51828 1080 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 AP3B2Q13367 1082 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 SART3Q15020 963 aaKnown RBP7.82□□□□□ -1.16
VCAN-206ENST00000505615 TMTC3Q6ZXV5 915 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 KBTBD6Q86V97 674 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 TEX2Q8IWB9 1127 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 GSTCDQ8NEC7 633 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 SLC7A14Q8TBB6 771 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 PIK3R5Q8WYR1 880 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 LENG9Q96B70 501 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 ZNF577Q9BSK1 485 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 EDEM2Q9BV94 578 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 INO80BQ9C086 356 aaPredicted RBP7.82□□□□□ -1.16
VCAN-206ENST00000505615 BRD9Q9H8M2 597 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 ZNF334Q9HCZ1 680 aaPredicted RBP7.82□□□□□ -1.16
VCAN-206ENST00000505615 TRPV5Q9NQA5 729 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 AVENQ9NQS1 362 aaPredicted RBP7.82□□□□□ -1.16
VCAN-206ENST00000505615 NRBP2Q9NSY0 501 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 TBC1D22BQ9NU19 505 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 CACNG4Q9UBN1 327 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 ADAM28Q9UKQ2 775 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 PTPRQQ9UMZ3 2332 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 POLIQ9UNA4 740 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 MRPS23Q9Y3D9 190 aaKnown RBP7.82□□□□□ -1.16
VCAN-206ENST00000505615 PCDHGA5Q9Y5G8 931 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 PIAS3Q9Y6X2 628 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 PTPRDP23468 1912 aa7.82□□□□□ -1.16
VCAN-206ENST00000505615 NUP210Q8TEM1 1887 aaPredicted RBP7.81□□□□□ -1.16
VCAN-206ENST00000505615 TNRC6BQ9UPQ9 1833 aaKnown RBP7.81□□□□□ -1.16
VCAN-206ENST00000505615 A0A1W2PRU2 124 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 C4orf47A7E2U8 309 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 WDR64B1ANS9 1081 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 E7EWF7 191 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 OIP5O43482 229 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 ITGA4P13612 1032 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 ZNF76P36508 570 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 CDC42EP1Q00587 391 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 SETQ01105 290 aaPredicted RBP7.81□□□□□ -1.16
VCAN-206ENST00000505615 PSMD5Q16401 504 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 MTERF2Q49AM1 385 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 FAM78AQ5JUQ0 283 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 PRSS36Q5K4E3 855 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 AXDND1Q5T1B0 1012 aaPredicted RBP7.81□□□□□ -1.16
VCAN-206ENST00000505615 SH3PXD2AQ5TCZ1 1133 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 VITQ6UXI7 678 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 RIPOR1Q6ZS17 1223 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 CACNA2D4Q7Z3S7 1137 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 PDZD3Q86UT5 571 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 RAB11FIP4Q86YS3 637 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 RHPN2Q8IUC4 686 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 NCOA7Q8NI08 942 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 LNX1Q8TBB1 728 aaPredicted RBP7.81□□□□□ -1.16
VCAN-206ENST00000505615 GAB3Q8WWW8 586 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 RABGGTAQ92696 567 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms