RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	CACTIN	Q8WUQ7	758 aa	Known RBP	11.41	□□□□□ -0.58
FXR1-222	ENST00000498658	C18orf25	Q96B23	403 aa	Predicted RBP	11.41	□□□□□ -0.58
FXR1-222	ENST00000498658	SUSD3	Q96L08	255 aa		11.41	□□□□□ -0.58
FXR1-222	ENST00000498658	B3GALT6	Q96L58	329 aa		11.41	□□□□□ -0.58
FXR1-222	ENST00000498658	KIAA1586	Q9HCI6	787 aa		11.41	□□□□□ -0.58
FXR1-222	ENST00000498658	MAN1C1	Q9NR34	630 aa		11.41	□□□□□ -0.58
FXR1-222	ENST00000498658	ZDHHC7	Q9NXF8	308 aa		11.41	□□□□□ -0.58
FXR1-222	ENST00000498658	SERTAD1	Q9UHV2	236 aa		11.41	□□□□□ -0.58
FXR1-222	ENST00000498658	MEFV	O15553	781 aa	Predicted RBP	11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	TGM5	O43548	720 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	ACTN4	O43707	911 aa	Known RBP	11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	PRPF6	O94906	941 aa	Known RBP	11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	KIF20A	O95235	890 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	NDUFA8	P51970	172 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	EHHADH	Q08426	723 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	PDAP1	Q13442	181 aa	Known RBP	11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	CUL4B	Q13620	913 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	RAB33A	Q14088	237 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	SURF1	Q15526	300 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	ZBTB41	Q5SVQ8	909 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	RARS2	Q5T160	578 aa	Known RBP	11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	LIN9	Q5TKA1	542 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	JADE1	Q6IE81	842 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	LILRA6	Q6PI73	481 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	GPR149	Q86SP6	731 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	PALB2	Q86YC2	1186 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	GPD1L	Q8N335	351 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	FSIP1	Q8NA03	581 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	C3orf58	Q8NDZ4	430 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	GOLGA5	Q8TBA6	731 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	PAGE5	Q96GU1	130 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	FAM213A	Q9BRX8	229 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	C1QTNF1	Q9BXJ1	281 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	BLZF1	Q9H2G9	400 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	EXOC1	Q9NV70	894 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	RBAK	Q9NYW8	714 aa	Predicted RBP	11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	MTRR	Q9UBK8	725 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	TUBGCP4	Q9UGJ1	667 aa		11.4	□□□□□ -0.58
FXR1-222	ENST00000498658	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	ZNF233	A6NK53	670 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	LOC730098	B7Z3J9	87 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	TISP43	B9A030	160 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	PAPLN	O95428	1278 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	TKT	P29401	623 aa	Known RBP	11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	BRCC3	P46736	316 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	SPAG1	Q07617	926 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	BMT2	Q1RMZ1	405 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	UVSSA	Q2YD98	709 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	VARS2	Q5ST30	1063 aa	Known RBP	11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	SLC8B1	Q6J4K2	584 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	CD300LG	Q6UXG3	332 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	TMC5	Q6UXY8	1006 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	DSTYK	Q6XUX3	929 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	USP37	Q86T82	979 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	BRSK2	Q8IWQ3	736 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	KREMEN2	Q8NCW0	462 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	MS4A3	Q96HJ5	214 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	CLSTN3	Q9BQT9	956 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	APOL5	Q9BWW9	433 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	MAFF	Q9ULX9	164 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	PCDHB8	Q9UN66	801 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	UST	Q9Y2C2	406 aa		11.39	□□□□□ -0.59
FXR1-222	ENST00000498658	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	CCDC195	A0A1B0GUA6	201 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658		M0QZQ0	153 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	ZNF202	O95125	648 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	NFIC	P08651	508 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	RPL17	P18621	184 aa	Known RBP	11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	HOXA9	P31269	272 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	OR1D2	P34982	312 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	ANP32A	P39687	249 aa	Known RBP	11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	PNPLA4	P41247	253 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	AARS	P49588	968 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	YWHAH	Q04917	246 aa	Predicted RBP	11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	KNOP1	Q1ED39	458 aa	Known RBP	11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	C9orf57	Q5W0N0	161 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	ZNF280D	Q6N043	979 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	KRBA2	Q6ZNG9	492 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	CCDC149	Q6ZUS6	474 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	GLYCTK	Q8IVS8	523 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	C12orf76	Q8N812	135 aa	Predicted RBP	11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	SCFD1	Q8WVM8	642 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	HPS3	Q969F9	1004 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	SAAL1	Q96ER3	474 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	RPGRIP1	Q96KN7	1286 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	CBWD1	Q9BRT8	395 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	FGFBP2	Q9BYJ0	223 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	PIDD1	Q9HB75	910 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	SLC39A2	Q9NP94	309 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	AGPAT3	Q9NRZ7	376 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	DPP3	Q9NY33	737 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	HOOK1	Q9UJC3	728 aa	Known RBP	11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	FBXW11	Q9UKB1	542 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	DSE	Q9UL01	958 aa		11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.38	□□□□□ -0.59
FXR1-222	ENST00000498658	CDY1	Q9Y6F8	540 aa		11.38	□□□□□ -0.59

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