RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 AP3B2Q13367 1082 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 WWC2Q6AWC2 1192 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 PCSK4Q6UW60 755 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 TOGARAM2Q6ZUX3 1019 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 CCDC82Q8N4S0 544 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 MINDY1Q8N5J2 469 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 DAGLBQ8NCG7 672 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 ZNF461Q8TAF7 563 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 DDX27Q96GQ7 796 aaKnown RBP16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 GPR88Q9GZN0 384 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 CSRNP2Q9H175 543 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 POLMQ9NP87 494 aaPredicted RBP16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 APOBEC2Q9Y235 224 aaKnown RBP16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 BACE2Q9Y5Z0 518 aa16.17■□□□□ 0.18
CHMP2B-205ENST00000494980 TRABD2BA6NFA1 517 aa16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 TKTP29401 623 aaKnown RBP16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 PTGER3P43115 390 aa16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 GNAQP50148 359 aa16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 EPHA5P54756 1037 aa16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 XKR3Q5GH77 459 aa16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 STXBP5Q5T5C0 1151 aa16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 CWC27Q6UX04 472 aaKnown RBP16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 SLCO6A1Q86UG4 719 aa16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 ARID3BQ8IVW6 561 aaPredicted RBP16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 TCEAL8Q8IYN2 117 aa16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 LEMD2Q8NC56 503 aa16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 TSTD1Q8NFU3 115 aa16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 RILPL2Q969X0 211 aa16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 CHFRQ96EP1 664 aa16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 ZNF512Q96ME7 567 aaPredicted RBP16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 CEP72Q9P209 647 aa16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 PARP2Q9UGN5 583 aa16.16■□□□□ 0.18
CHMP2B-205ENST00000494980 HELZP42694 1942 aaKnown RBP16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 PLXND1Q9Y4D7 1925 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 DPYSL4O14531 572 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 TRDMT1O14717 391 aaKnown RBP16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 TNFRSF10BO14763 440 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 ABLIM3O94929 683 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 STBD1O95210 358 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 RXRAP19793 462 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 SDSP20132 328 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 PDE1AP54750 535 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 PRR16Q569H4 304 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 ANKS3Q6ZW76 656 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 LPCAT2Q7L5N7 544 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 TMPRSS7Q7RTY8 843 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 PRPF31Q8WWY3 499 aaKnown RBP16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 CRYGNQ8WXF5 182 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 STK24Q9Y6E0 443 aa16.15■□□□□ 0.18
CHMP2B-205ENST00000494980 A0A1W2PRU2 124 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 CYP3A4P08684 503 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 CALM1P0DP23 149 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 CALM2P0DP24 149 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 CALM3P0DP25 149 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 ATF2P15336 505 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 IGFBP6P24592 240 aaPredicted RBP16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 AXLP30530 894 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 ARPP19P56211 112 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 PLCB2Q00722 1185 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 GFPT1Q06210 699 aaPredicted RBP16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 LAMTOR4Q0VGL1 99 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 TWF1Q12792 350 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 PLA2G4FQ68DD2 849 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 ANO7Q6IWH7 933 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 ACDQ96AP0 544 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 JPH2Q9BR39 696 aaPredicted RBP16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 FBRSL1Q9HCM7 1045 aaKnown RBP16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 SLC6A14Q9UN76 642 aa16.14■□□□□ 0.17
CHMP2B-205ENST00000494980 TRIP11Q15643 1979 aa16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 NPTXRO95502 500 aa16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 CLK2P49760 499 aaKnown RBP16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 JAK3P52333 1124 aa16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 PTPAQ15257 358 aa16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 JAKMIP3Q5VZ66 844 aa16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 SLC8B1Q6J4K2 584 aa16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 RALYLQ86SE5 291 aaKnown RBP16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 NAXDQ8IW45 347 aa16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 RNF149Q8NC42 400 aa16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 PSPC1Q8WXF1 523 aaKnown RBP16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 TMEM143Q96AN5 459 aa16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 UNC45AQ9H3U1 944 aa16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 PILRBQ9UKJ0 227 aa16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 CIZ1Q9ULV3 898 aaPredicted RBP16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 UTP20O75691 2785 aaKnown RBP16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 BOD1L1Q8NFC6 3051 aa16.13■□□□□ 0.17
CHMP2B-205ENST00000494980 TEX51A0A1B0GUA7 166 aa16.12■□□□□ 0.17
CHMP2B-205ENST00000494980 DDX11L8A8MPP1 907 aa16.12■□□□□ 0.17
CHMP2B-205ENST00000494980 I3L4J1 428 aa16.12■□□□□ 0.17
CHMP2B-205ENST00000494980 PTGESO14684 152 aa16.12■□□□□ 0.17
CHMP2B-205ENST00000494980 ITPKAP23677 461 aa16.12■□□□□ 0.17
CHMP2B-205ENST00000494980 U2AF2P26368 475 aaKnown RBP eCLIP16.12■□□□□ 0.17
CHMP2B-205ENST00000494980 SFNP31947 248 aa16.12■□□□□ 0.17
CHMP2B-205ENST00000494980 ANTXR2P58335 489 aa16.12■□□□□ 0.17
CHMP2B-205ENST00000494980 LYSMD4Q5XG99 296 aa16.12■□□□□ 0.17
CHMP2B-205ENST00000494980 NAIF1Q69YI7 327 aaPredicted RBP16.12■□□□□ 0.17
CHMP2B-205ENST00000494980 PPP1R18Q6NYC8 613 aa16.12■□□□□ 0.17
CHMP2B-205ENST00000494980 KRT25Q7Z3Z0 450 aa16.12■□□□□ 0.17
CHMP2B-205ENST00000494980 CDR2LQ86X02 465 aaPredicted RBP16.12■□□□□ 0.17
CHMP2B-205ENST00000494980 TEX2Q8IWB9 1127 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms