RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 EPHX3Q9H6B9 360 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 USTQ9Y2C2 406 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 CDY1Q9Y6F8 540 aa19.14■□□□□ 0.65
HDAC4-211ENST00000494800 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-211ENST00000494800 A0A1B0GVL5 298 aa19.13■□□□□ 0.65
HDAC4-211ENST00000494800 MYL1P05976 194 aa19.13■□□□□ 0.65
HDAC4-211ENST00000494800 SP100P23497 879 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-211ENST00000494800 DSTYKQ6XUX3 929 aa19.13■□□□□ 0.65
HDAC4-211ENST00000494800 PLCD3Q8N3E9 789 aa19.13■□□□□ 0.65
HDAC4-211ENST00000494800 NOC3LQ8WTT2 800 aaKnown RBP19.13■□□□□ 0.65
HDAC4-211ENST00000494800 SMG7Q92540 1137 aaKnown RBP19.13■□□□□ 0.65
HDAC4-211ENST00000494800 CCDC34Q96HJ3 373 aa19.13■□□□□ 0.65
HDAC4-211ENST00000494800 BLZF1Q9H2G9 400 aa19.13■□□□□ 0.65
HDAC4-211ENST00000494800 SERTAD1Q9UHV2 236 aa19.13■□□□□ 0.65
HDAC4-211ENST00000494800 CDH22Q9UJ99 828 aa19.13■□□□□ 0.65
HDAC4-211ENST00000494800 FBXW11Q9UKB1 542 aa19.13■□□□□ 0.65
HDAC4-211ENST00000494800 PCDHB8Q9UN66 801 aa19.13■□□□□ 0.65
HDAC4-211ENST00000494800 UBE4BO95155 1302 aa19.13■□□□□ 0.65
HDAC4-211ENST00000494800 RFPL2O75678 378 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 ZMYND10O75800 440 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 NFICP08651 508 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 HNRNPA1P09651 372 aaKnown RBP eCLIP19.12■□□□□ 0.65
HDAC4-211ENST00000494800 IGFBP6P24592 240 aaPredicted RBP19.12■□□□□ 0.65
HDAC4-211ENST00000494800 SYKP43405 635 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 TMEM31Q5JXX7 168 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 PPM1LQ5SGD2 360 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 ZNF280DQ6N043 979 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 RTL10Q7L3V2 364 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 OTOP3Q7RTS5 596 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 USP37Q86T82 979 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 KHSRPQ92945 711 aaKnown RBP eCLIP19.12■□□□□ 0.65
HDAC4-211ENST00000494800 HPS3Q969F9 1004 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 SAAL1Q96ER3 474 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 OXCT2Q9BYC2 517 aaPredicted RBP19.12■□□□□ 0.65
HDAC4-211ENST00000494800 FGFBP2Q9BYJ0 223 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 PRKD2Q9BZL6 878 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 IKZF4Q9H2S9 585 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 RBAKQ9NYW8 714 aaPredicted RBP19.12■□□□□ 0.65
HDAC4-211ENST00000494800 MUTYHQ9UIF7 546 aa19.12■□□□□ 0.65
HDAC4-211ENST00000494800 NCOR1O75376 2440 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 A0A1W2PQ27 194 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 A0A1W2PQ64 194 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 A0A1W2PQD8 194 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 ACTN4O43707 911 aaKnown RBP19.11■□□□□ 0.65
HDAC4-211ENST00000494800 EXTL3O43909 919 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 XYLBO75191 536 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 C8AP07357 584 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 ELF1P32519 619 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 SNRPFP62306 86 aaKnown RBP19.11■□□□□ 0.65
HDAC4-211ENST00000494800 YWHAHQ04917 246 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-211ENST00000494800 CUL4BQ13620 913 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 UVSSAQ2YD98 709 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 CTXN3Q4LDR2 81 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 SLC8B1Q6J4K2 584 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 HS2ST1Q7LGA3 356 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 GPD1LQ8N335 351 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 ZNF507Q8TCN5 953 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 CACTINQ8WUQ7 758 aaKnown RBP19.11■□□□□ 0.65
HDAC4-211ENST00000494800 CCDC47Q96A33 483 aaKnown RBP19.11■□□□□ 0.65
HDAC4-211ENST00000494800 PAGE5Q96GU1 130 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 KIAA1586Q9HCI6 787 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 EXOC1Q9NV70 894 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 HPSEQ9Y251 543 aa19.11■□□□□ 0.65
HDAC4-211ENST00000494800 GOLGA6L4A6NEF3 574 aa19.1■□□□□ 0.65
HDAC4-211ENST00000494800 M0QZQ0 153 aa19.1■□□□□ 0.65
HDAC4-211ENST00000494800 ADAM12O43184 909 aa19.1■□□□□ 0.65
HDAC4-211ENST00000494800 ODC1P11926 461 aa19.1■□□□□ 0.65
HDAC4-211ENST00000494800 HOXA9P31269 272 aa19.1■□□□□ 0.65
HDAC4-211ENST00000494800 C9orf57Q5W0N0 161 aa19.1■□□□□ 0.65
HDAC4-211ENST00000494800 CRELD2Q6UXH1 353 aaPredicted RBP19.1■□□□□ 0.65
HDAC4-211ENST00000494800 BRSK2Q8IWQ3 736 aa19.1■□□□□ 0.65
HDAC4-211ENST00000494800 ZNF461Q8TAF7 563 aa19.1■□□□□ 0.65
HDAC4-211ENST00000494800 SLC7A14Q8TBB6 771 aa19.1■□□□□ 0.65
HDAC4-211ENST00000494800 CBWD1Q9BRT8 395 aa19.1■□□□□ 0.65
HDAC4-211ENST00000494800 PCIF1Q9H4Z3 704 aa19.1■□□□□ 0.65
HDAC4-211ENST00000494800 WDR6Q9NNW5 1121 aaKnown RBP19.1■□□□□ 0.65
HDAC4-211ENST00000494800 DPP3Q9NY33 737 aa19.1■□□□□ 0.65
HDAC4-211ENST00000494800 TRIP11Q15643 1979 aa19.1■□□□□ 0.65
HDAC4-211ENST00000494800 CLUHO75153 1309 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 C5orf42Q9H799 3197 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 C2CD4DB7Z1M9 353 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 GPR37L1O60883 481 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 PAPLNO95428 1278 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 CASP1P29466 404 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 AARSP49588 968 aaKnown RBP eCLIP19.09■□□□□ 0.65
HDAC4-211ENST00000494800 GUCY2FP51841 1108 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 ARPP19P56211 112 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 LILRA4P59901 499 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 ROR1Q01973 937 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 PSMD2Q13200 908 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 SURF1Q15526 300 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 EPM2AIP1Q7L775 607 aaPredicted RBP19.09■□□□□ 0.65
HDAC4-211ENST00000494800 GRAMD1CQ8IYS0 662 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 ZDHHC14Q8IZN3 488 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 FSIP1Q8NA03 581 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 CHAMP1Q96JM3 812 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 ZNF560Q96MR9 790 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 CGNQ9P2M7 1197 aaKnown RBP19.09■□□□□ 0.65
HDAC4-211ENST00000494800 FBXL5Q9UKA1 691 aa19.09■□□□□ 0.65
HDAC4-211ENST00000494800 R3HCC1Q9Y3T6 440 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms