RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 VPS54Q9P1Q0 977 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 STK39Q9UEW8 545 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 DMTF1Q9Y222 760 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 HPSEQ9Y251 543 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 GPSM3Q9Y4H4 160 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 ZNF804BA4D1E1 1349 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 WDR19Q8NEZ3 1342 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 BTBD19C9JJ37 291 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 H7C0C1 242 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 DDX3XO00571 662 aaKnown RBP eCLIP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 ONECUT3O60422 494 aaPredicted RBP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 FOXD2O60548 495 aaPredicted RBP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 CCDC22O60826 627 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 PPP6R2O75170 966 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 PALMO75781 387 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 PLEKP08567 350 aaPredicted RBP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 CD44P16070 742 aaKnown RBP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 CHN2P52757 468 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 AP3M2P53677 418 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 CDC16Q13042 620 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 RPS6KA1Q15418 735 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 KCNJ8Q15842 424 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 TAF1BQ53T94 588 aaPredicted RBP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 TCP11X2Q5H9J9 407 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 RALYLQ86SE5 291 aaKnown RBP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 PASD1Q8IV76 773 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 RHOT2Q8IXI1 618 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 SLC38A6Q8IZM9 456 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 ZBTB38Q8NAP3 1195 aaPredicted RBP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 NPLOC4Q8TAT6 608 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 BRSK1Q8TDC3 778 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 PPP4R1Q8TF05 950 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 PMEPA1Q969W9 287 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 KIAA1586Q9HCI6 787 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 LRRC4CQ9HCJ2 640 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 HOXC10Q9NYD6 342 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 UVRAGQ9P2Y5 699 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 IP6K2Q9UHH9 426 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 RABGEF1Q9UJ41 708 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 AK5Q9Y6K8 562 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 KLF18A0A0U1RQI7 1052 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 A8MX80 341 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 CCRL2O00421 344 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 FECHP22830 423 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 PCSK6P29122 969 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 PGM1P36871 562 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 EIF4A3P38919 411 aaKnown RBP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 GRIA2P42262 883 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 DR1Q01658 176 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 PDK3Q15120 406 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 ADRM1Q16186 407 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 LRRC24Q50LG9 513 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 RNF43Q68DV7 783 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 ITPRIPL1Q6GPH6 555 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 LMBR1LQ6UX01 489 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 MAMSTRQ6ZN01 415 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 CROCCP2Q86T23 111 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 ZBTB46Q86UZ6 589 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 CENPSQ8N2Z9 138 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 MB21D1Q8N884 522 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 EME1Q96AY2 570 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 INPP4AQ96PE3 977 aaPredicted RBP7.24□□□□□ -1.25
VPS13B-205ENST00000493587 PLEKHA5Q9HAU0 1116 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 APPL1Q9UKG1 709 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 PCDHGA8Q9Y5G5 932 aa7.24□□□□□ -1.25
VPS13B-205ENST00000493587 C10orf71Q711Q0 1435 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 PSMD11O00231 422 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 SEMA3EO15041 775 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 ECE2O60344 883 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 CCDC159P0C7I6 412 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 PDIA3P30101 505 aaKnown RBP7.23□□□□□ -1.25
VPS13B-205ENST00000493587 ADSLP30566 484 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-205ENST00000493587 SLC5A3P53794 718 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 CD300CQ08708 224 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 SLC29A2Q14542 456 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 TIGD2Q4W5G0 525 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 WDR59Q6PJI9 974 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 RGS9BPQ6ZS82 235 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 APTXQ7Z2E3 356 aaKnown RBP7.23□□□□□ -1.25
VPS13B-205ENST00000493587 HDAC2Q92769 488 aaKnown RBP7.23□□□□□ -1.25
VPS13B-205ENST00000493587 FERMT1Q9BQL6 677 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 DSCC1Q9BVC3 393 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 C10orf88Q9H8K7 445 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 SACM1LQ9NTJ5 587 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 ANGEL1Q9UNK9 670 aaKnown RBP7.23□□□□□ -1.25
VPS13B-205ENST00000493587 VILLO15195 856 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 KMOO15229 486 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 EXOC3O60645 756 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 CAMTA2O94983 1202 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 CYP21A2P08686 494 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 KRT5P13647 590 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 BRAFP15056 766 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 WEE1P30291 646 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 CIITAP33076 1130 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 IL6STP40189 918 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-205ENST00000493587 CASP5P51878 434 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 AMPD3Q01432 767 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 PLCB3Q01970 1234 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms