RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 MCL1Q07820 350 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 IQCB1Q15051 598 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 KYAT1Q16773 422 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 ZCWPW2Q504Y3 356 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 RTP2Q5QGT7 225 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 FAM171A1Q5VUB5 890 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 TMC5Q6UXY8 1006 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 CYP26C1Q6V0L0 522 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 GUF1Q8N442 669 aaKnown RBP11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 MLKLQ8NB16 471 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 ZNF507Q8TCN5 953 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 HASPINQ8TF76 798 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 PIK3R5Q8WYR1 880 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 DDX27Q96GQ7 796 aaKnown RBP11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 B3GALT6Q96L58 329 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 RHOBTB2Q9BYZ6 727 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 KCTD10Q9H3F6 313 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 PLEKHA4Q9H4M7 779 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 MRPL44Q9H9J2 332 aaKnown RBP11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 ANO10Q9NW15 660 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 CNTN3Q9P232 1028 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 TBX20Q9UMR3 447 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 MAPK8IP1Q9UQF2 711 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 USTQ9Y2C2 406 aa11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.48□□□□□ -0.57
SCAMP4-208ENST00000489554 HNRNPDLO14979 420 aaKnown RBP11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 EIF3DO15371 548 aaKnown RBP eCLIP11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 TGFB1I1O43294 461 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 PRPF6O94906 941 aaKnown RBP11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 PIGRP01833 764 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 CLTAP09496 248 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 MATR3P43243 847 aaKnown RBP eCLIP11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 LIG4P49917 911 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 CLCNKBP51801 687 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 NCAPHQ15003 741 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 UPP1Q16831 310 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 CENPPQ6IPU0 288 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 CEP57Q86XR8 500 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 MAP4K3Q8IVH8 894 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 TDRD5Q8NAT2 981 aaKnown RBP11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 EDAQ92838 391 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 ZBTB45Q96K62 511 aaPredicted RBP11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 HSD3B7Q9H2F3 369 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 TSPY26PQ9H489 355 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 PLEKHA5Q9HAU0 1116 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 CDH22Q9UJ99 828 aa11.47□□□□□ -0.57
SCAMP4-208ENST00000489554 UBE4BO95155 1302 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 TRIM49BA6NDI0 452 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 C2CD4DB7Z1M9 353 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 TGM5O43548 720 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 GCNT3O95395 438 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 PAPLNO95428 1278 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 WEE2P0C1S8 567 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 FGFR3P22607 806 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 RPL9P32969 192 aaKnown RBP11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 PSMD5Q16401 504 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 PTPN21Q16825 1174 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 TTI2Q6NXR4 508 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 SLC39A4Q6P5W5 647 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 LILRA6Q6PI73 481 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 PRSS55Q6UWB4 352 aaPredicted RBP11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 CCDC149Q6ZUS6 474 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 PALB2Q86YC2 1186 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 DHX40Q8IX18 779 aaKnown RBP11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 ZC3H3Q8IXZ2 948 aaKnown RBP11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 ZDHHC14Q8IZN3 488 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 PLCD3Q8N3E9 789 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 LNX1Q8TBB1 728 aaPredicted RBP11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 CCDC47Q96A33 483 aaKnown RBP11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 ZMAT2Q96NC0 199 aaKnown RBP11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 DUSP9Q99956 384 aaKnown RBP11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 BPIFA3Q9BQP9 254 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 GTPBP4Q9BZE4 634 aaKnown RBP11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 GOLGA2P5Q9HBQ8 144 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 CBX8Q9HC52 389 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 ZDHHC7Q9NXF8 308 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 CTNND2Q9UQB3 1225 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 HCN4Q9Y3Q4 1203 aa11.46□□□□□ -0.57
SCAMP4-208ENST00000489554 CCDC195A0A1B0GUA6 201 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 TISP43B9A030 160 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 PODXLO00592 558 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 CAVIN2O95810 425 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 RPL17P18621 184 aaKnown RBP11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 SP100P23497 879 aaPredicted RBP11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 CCNE1P24864 410 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 ERCC5P28715 1186 aaPredicted RBP11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 ZXDAP98168 799 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 SOX4Q06945 474 aaPredicted RBP11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 ALCAMQ13740 583 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 UVSSAQ2YD98 709 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 SLC10A6Q3KNW5 377 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 CT47A1Q5JQC4 288 aaPredicted RBP11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 FOXR2Q6PJQ5 311 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 ANKS3Q6ZW76 656 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 OTOP3Q7RTS5 596 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 GLYCTKQ8IVS8 523 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 NELFCDQ8IXH7 590 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 KREMEN2Q8NCW0 462 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 NELFBQ8WX92 580 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms