RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 AARSP49588 968 aaKnown RBP eCLIP12.49□□□□□ -0.41
SCFD1-206ENST00000484733 MLF2Q15773 248 aaPredicted RBP12.49□□□□□ -0.41
SCFD1-206ENST00000484733 CTXN3Q4LDR2 81 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 SLC44A4Q53GD3 710 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 ELSPBP1Q96BH3 223 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 BLOC1S4Q9NUP1 217 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 UBQLN1Q9UMX0 589 aaKnown RBP12.49□□□□□ -0.41
SCFD1-206ENST00000484733 KANSL1LA0AUZ9 987 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 PRRG1O14668 218 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 XPOTO43592 962 aaKnown RBP12.49□□□□□ -0.41
SCFD1-206ENST00000484733 FAM189A1O60320 539 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 OAZ2O95190 189 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 SEC24AO95486 1093 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 MCM4P33991 863 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 UBA7P41226 1012 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 MAGEA9P43362 315 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 SLC5A9Q2M3M2 681 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 LARP1BQ659C4 914 aaKnown RBP12.49□□□□□ -0.41
SCFD1-206ENST00000484733 CD302Q8IX05 232 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 LEMD2Q8NC56 503 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 BEST2Q8NFU1 509 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 REEP2Q9BRK0 252 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 TUBGCP4Q9UGJ1 667 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 TBX20Q9UMR3 447 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 INSL5Q9Y5Q6 135 aa12.49□□□□□ -0.41
SCFD1-206ENST00000484733 OGTO15294 1046 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 CXCL8P10145 99 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 MARCKSP29966 332 aaPredicted RBP12.48□□□□□ -0.41
SCFD1-206ENST00000484733 SEZ6Q53EL9 994 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 GPBP1Q86WP2 473 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 LRRC15Q8TF66 581 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 RAD54LQ92698 747 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 CYP4F11Q9HBI6 524 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 DCNP07585 359 aaKnown RBP12.48□□□□□ -0.41
SCFD1-206ENST00000484733 CEBPBP17676 345 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 MATR3P43243 847 aaKnown RBP eCLIP12.48□□□□□ -0.411e-6■■■□□ 19
SCFD1-206ENST00000484733 LIG4P49917 911 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 EPHA5P54756 1037 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
SCFD1-206ENST00000484733 PPP2R3AQ06190 1150 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 POTEHQ6S545 545 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 C1orf210Q8IVY1 113 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 ING5Q8WYH8 240 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 MCRS1Q96EZ8 462 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 KIF12Q96FN5 646 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 BICD1Q96G01 975 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 NELL2Q99435 816 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 KXD1Q9BQD3 176 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 CCSER1Q9C0I3 900 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 PARVGQ9HBI0 331 aa12.48□□□□□ -0.41
SCFD1-206ENST00000484733 MIA3Q5JRA6 1907 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 A0A0B4J269 797 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 LACTBL1A8MY62 500 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 FAM13AO94988 1023 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 TYMPP19971 482 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 ARPP19P56211 112 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 GTF2BQ00403 316 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 POU5F1Q01860 360 aaKnown RBP12.47□□□□□ -0.41
SCFD1-206ENST00000484733 SNW1Q13573 536 aaKnown RBP12.47□□□□□ -0.41
SCFD1-206ENST00000484733 ELMOD1Q8N336 334 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 MYCT1Q8N699 235 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 ST13P5Q8NFI4 369 aaPredicted RBP12.47□□□□□ -0.41
SCFD1-206ENST00000484733 DNASE1L2Q92874 299 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 FIZ1Q96SL8 496 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 CORO1BQ9BR76 489 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 PLA2G2FQ9BZM2 168 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 FOXQ1Q9C009 403 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 ST6GALNAC4Q9H4F1 302 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 RPF1Q9H9Y2 349 aaKnown RBP12.47□□□□□ -0.41
SCFD1-206ENST00000484733 DERAQ9Y315 318 aa12.47□□□□□ -0.41
SCFD1-206ENST00000484733 OR6C75A6NL08 312 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 TRAK2O60296 914 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 SP9P0CG40 484 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 GLULP15104 373 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 TNFSF9P41273 254 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 CUL4AQ13619 759 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 MCM6Q14566 821 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 ENOX2Q16206 610 aaKnown RBP12.46□□□□□ -0.41
SCFD1-206ENST00000484733 ZNF528Q3MIS6 628 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 CYP4A22Q5TCH4 519 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 SPATA1Q5VX52 437 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 TANGO2Q6ICL3 276 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 ADSSL1Q8N142 457 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 ZNF512Q96ME7 567 aaPredicted RBP12.46□□□□□ -0.41
SCFD1-206ENST00000484733 LTB4R2Q9NPC1 389 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 CPSF3Q9UKF6 684 aaKnown RBP12.46□□□□□ -0.41
SCFD1-206ENST00000484733 K7ENM7 598 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 PLCG1P19174 1290 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 FCARP24071 287 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 YWHAHQ04917 246 aaPredicted RBP12.46□□□□□ -0.41
SCFD1-206ENST00000484733 ADCY1Q08828 1119 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 MYBPC2Q14324 1141 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 SPECC1Q5M775 1068 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 IQCEQ6IPM2 695 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 RNF19BQ6ZMZ0 732 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 PDZD4Q76G19 769 aaPredicted RBP12.46□□□□□ -0.41
SCFD1-206ENST00000484733 MAP4K3Q8IVH8 894 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 CLDN23Q96B33 292 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 BCO2Q9BYV7 579 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 TRPV4Q9HBA0 871 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms