RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 MBTD1Q05BQ5 628 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 TWF1Q12792 350 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 ZNF423Q2M1K9 1284 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 LRCH2Q5VUJ6 765 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 MIER3Q7Z3K6 550 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 TMC8Q8IU68 726 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 FANCBQ8NB91 859 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 RPLP0P6Q8NHW5 317 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 ZNF461Q8TAF7 563 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 PIP4K2CQ8TBX8 421 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 CCDC51Q96ER9 411 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 TEKT3Q9BXF9 490 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 LRRC3Q9BY71 257 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 TRIM6Q9C030 488 aaPredicted RBP13.59□□□□□ -0.23
HDAC8-217ENST00000478743 DHX33Q9H6R0 707 aaKnown RBP13.59□□□□□ -0.23
HDAC8-217ENST00000478743 BARHL2Q9NY43 387 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 RCAN3Q9UKA8 241 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
HDAC8-217ENST00000478743 CCDC69A6NI79 296 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 UPK3BL1B0FP48 263 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 UPK3BL2E5RIL1 263 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 PSMD10O75832 226 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 FTH1P19P0C7X4 201 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 CD59P13987 128 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 CYP4A22Q5TCH4 519 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 SLC8B1Q6J4K2 584 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 PDXDC1Q6P996 788 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 FERMT3Q86UX7 667 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 ARID3BQ8IVW6 561 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-217ENST00000478743 TCEAL8Q8IYN2 117 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 FRMD1Q8N878 549 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 ADAMTS14Q8WXS8 1223 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 POLR3CQ9BUI4 534 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-217ENST00000478743 GOLGA2P5Q9HBQ8 144 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 HPS4Q9NQG7 708 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 V9GY48 417 aaPredicted RBP13.58□□□□□ -0.24
HDAC8-217ENST00000478743 ZMYM2Q9UBW7 1377 aa13.58□□□□□ -0.24
HDAC8-217ENST00000478743 TTLL13PA6NNM8 815 aa13.57□□□□□ -0.24
HDAC8-217ENST00000478743 INO80B-WBP1J3KQ70 363 aa13.57□□□□□ -0.24
HDAC8-217ENST00000478743 APBB3O95704 486 aa13.57□□□□□ -0.24
HDAC8-217ENST00000478743 ATF2P15336 505 aa13.57□□□□□ -0.24
HDAC8-217ENST00000478743 AXLP30530 894 aa13.57□□□□□ -0.24
HDAC8-217ENST00000478743 PTGER3P43115 390 aa13.57□□□□□ -0.24
HDAC8-217ENST00000478743 PTENP60484 403 aa13.57□□□□□ -0.24
HDAC8-217ENST00000478743 ELAVL2Q12926 359 aaKnown RBP13.57□□□□□ -0.24
HDAC8-217ENST00000478743 DMC1Q14565 340 aa13.57□□□□□ -0.24
HDAC8-217ENST00000478743 PCSK4Q6UW60 755 aa13.57□□□□□ -0.24
HDAC8-217ENST00000478743 ASAP3Q8TDY4 903 aa13.57□□□□□ -0.24
HDAC8-217ENST00000478743 RIT2Q99578 217 aa13.57□□□□□ -0.24
HDAC8-217ENST00000478743 GTPBP2Q9BX10 602 aaKnown RBP13.57□□□□□ -0.24
HDAC8-217ENST00000478743 SMG9Q9H0W8 520 aaKnown RBP13.57□□□□□ -0.24
HDAC8-217ENST00000478743 ASAH2Q9NR71 780 aa13.57□□□□□ -0.24
HDAC8-217ENST00000478743 EBF1Q9UH73 591 aa13.57□□□□□ -0.24
HDAC8-217ENST00000478743 CEP192Q8TEP8 1941 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 A0A087WV48 116 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 TK2O00142 265 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 EML1O00423 815 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 VNN2O95498 520 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 ITPKBP27987 946 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 ELF1P32519 619 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 LMAN2Q12907 356 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 CAPSQ13938 189 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 EMC2Q15006 297 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 ARHGAP29Q52LW3 1261 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 GLRA4Q5JXX5 417 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 TRIM68Q6AZZ1 485 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 DNAJC25Q9H1X3 360 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 XPNPEP1Q9NQW7 623 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
HDAC8-217ENST00000478743 PLXND1Q9Y4D7 1925 aa13.56□□□□□ -0.24
HDAC8-217ENST00000478743 ATMQ13315 3056 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 TMEM189-UBE2V1I3L0A0 370 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 TBX3O15119 743 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 ATG13O75143 517 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 RECQL4O94761 1208 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 B3GAT3O94766 335 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 CLCNKBP51801 687 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 SRSF1Q07955 248 aaKnown RBP eCLIP13.55□□□□□ -0.24
HDAC8-217ENST00000478743 CYP4F3Q08477 520 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 GRSF1Q12849 480 aaKnown RBP eCLIP13.55□□□□□ -0.24
HDAC8-217ENST00000478743 ITPRIPL2Q3MIP1 535 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 SLC27A1Q6PCB7 646 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 CASC1Q6TDU7 716 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 ANKS3Q6ZW76 656 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 SYT13Q7L8C5 426 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 SLCO6A1Q86UG4 719 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 RIN3Q8TB24 985 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 RLN3Q8WXF3 142 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 SLC7A3Q8WY07 619 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 CCDC136Q96JN2 1154 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 CEP170P1Q96L14 293 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 NUSAP1Q9BXS6 441 aaKnown RBP13.55□□□□□ -0.24
HDAC8-217ENST00000478743 CRISPLD1Q9H336 500 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 IGSF5Q9NSI5 407 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 USP20Q9Y2K6 914 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 YIPF1Q9Y548 306 aa13.55□□□□□ -0.24
HDAC8-217ENST00000478743 PTPN13Q12923 2485 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 TRDMT1O14717 391 aaKnown RBP13.54□□□□□ -0.24
HDAC8-217ENST00000478743 ZBTB39O15060 712 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms