RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 KRT10P13645 584 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 CD19P15391 556 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 NR1D1P20393 614 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 PAX7P23759 505 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 RPL21P46778 160 aaKnown RBP10.05□□□□□ -0.8
TOP3A-203ENST00000469739 GPC3P51654 580 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 CDH8P55286 799 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 MYL6P60660 151 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 NOP14P78316 857 aaKnown RBP10.05□□□□□ -0.8
TOP3A-203ENST00000469739 CYP4A22Q5TCH4 519 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 LBX2Q6XYB7 198 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 SAMD3Q8N6K7 520 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 SPATA33Q96N06 139 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 PORCNQ9H237 461 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 CARD9Q9H257 536 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 SEMA4AQ9H3S1 761 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 C10orf88Q9H8K7 445 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 GOLGA8KD6RF30 607 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 GOLGA8SH3BPF8 625 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 NDUFAB1O14561 156 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 KIAA0754O94854 1291 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 MYZAPP0CAP1 466 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 RPL7AP62424 266 aaKnown RBP10.04□□□□□ -0.8
TOP3A-203ENST00000469739 SARNPP82979 210 aaKnown RBP10.04□□□□□ -0.8
TOP3A-203ENST00000469739 ZNF844Q08AG5 666 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 NCOA4Q13772 614 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 C11orf91Q3C1V1 193 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 ALS2CLQ60I27 953 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 NAIF1Q69YI7 327 aaPredicted RBP10.04□□□□□ -0.8
TOP3A-203ENST00000469739 C12orf56Q8IXR9 622 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 GPC2Q8N158 579 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 RASGEF1CQ8N431 466 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 WHAMMQ8TF30 809 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 PSPC1Q8WXF1 523 aaKnown RBP10.04□□□□□ -0.8
TOP3A-203ENST00000469739 DDX1Q92499 740 aaKnown RBP10.04□□□□□ -0.8
TOP3A-203ENST00000469739 NTPCRQ9BSD7 190 aaKnown RBP10.04□□□□□ -0.8
TOP3A-203ENST00000469739 MLXIPLQ9NP71 852 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 MAP3K20Q9NYL2 800 aaKnown RBP10.04□□□□□ -0.8
TOP3A-203ENST00000469739 ADAM22Q9P0K1 906 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 ASIC3Q9UHC3 531 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 ADAMTS5Q9UNA0 930 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 SSC5DA1L4H1 1573 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 WDR90Q96KV7 1748 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 CCDC188H7C350 402 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 MAFGO15525 162 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 GRIN3BO60391 1043 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 ACSL3O95573 720 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 ATF7P17544 494 aaPredicted RBP10.04□□□□□ -0.8
TOP3A-203ENST00000469739 FNTAP49354 379 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 MAGOHP61326 146 aaKnown RBP10.04□□□□□ -0.8
TOP3A-203ENST00000469739 TAGLNQ01995 201 aaKnown RBP10.04□□□□□ -0.8
TOP3A-203ENST00000469739 MYBPC2Q14324 1141 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 PREPLQ4J6C6 727 aaPredicted RBP10.04□□□□□ -0.8
TOP3A-203ENST00000469739 ACAD10Q6JQN1 1059 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 USP37Q86T82 979 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 FMNL3Q8IVF7 1028 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 OTUD6BQ8N6M0 293 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 RBBP8NLQ8NC74 664 aaPredicted RBP10.04□□□□□ -0.8
TOP3A-203ENST00000469739 SCLT1Q96NL6 688 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 ERP44Q9BS26 406 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 PDLIM7Q9NR12 457 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 GINM1Q9NU53 330 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 TJP2Q9UDY2 1190 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 CLEC11AQ9Y240 323 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 R3HDM2Q9Y2K5 976 aaKnown RBP10.04□□□□□ -0.8
TOP3A-203ENST00000469739 EVPLQ92817 2033 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 PEX5P50542 639 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 PTENP60484 403 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 GHRHRQ02643 423 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 ZACNQ401N2 412 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 SGO2Q562F6 1265 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 C9orf131Q5VYM1 1079 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 EEF1DP3Q658K8 133 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 ST6GALNAC4Q9H4F1 302 aa10.04□□□□□ -0.8
TOP3A-203ENST00000469739 MAFBQ9Y5Q3 323 aaPredicted RBP10.04□□□□□ -0.8
TOP3A-203ENST00000469739 E7EVH7 732 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 EIF3HO15372 352 aaKnown RBP eCLIP10.03□□□□□ -0.87e-7■□□□□ 9.9
TOP3A-203ENST00000469739 P4HA2O15460 535 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 DKC1O60832 514 aaKnown RBP eCLIP10.03□□□□□ -0.8
TOP3A-203ENST00000469739 C4BPAP04003 597 aaKnown RBP10.03□□□□□ -0.8
TOP3A-203ENST00000469739 TXNP10599 105 aaKnown RBP10.03□□□□□ -0.8
TOP3A-203ENST00000469739 GTF2H1P32780 548 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 TAS2R40P59535 323 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 DYNLT1P63172 113 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 CUL2Q13617 745 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 SLC29A2Q14542 456 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 KCTD2Q14681 263 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 CLEC16AQ2KHT3 1053 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 SYCP2LQ5T4T6 812 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 TMC3Q7Z5M5 1100 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 SLC13A5Q86YT5 568 aaPredicted RBP10.03□□□□□ -0.8
TOP3A-203ENST00000469739 C1orf131Q8NDD1 294 aaKnown RBP10.03□□□□□ -0.8
TOP3A-203ENST00000469739 SEPT1Q8WYJ6 367 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 ATP6V1G3Q96LB4 118 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 SH3GL2Q99962 352 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 SELENOSQ9BQE4 189 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 DHX33Q9H6R0 707 aaKnown RBP10.03□□□□□ -0.8
TOP3A-203ENST00000469739 MINDY3Q9H8M7 445 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 NRBP2Q9NSY0 501 aa10.03□□□□□ -0.8
TOP3A-203ENST00000469739 SAE1Q9UBE0 346 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms