RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 GCNT1Q02742 428 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 CETN1Q12798 172 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 TMEM132AQ24JP5 1023 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 JADE1Q6IE81 842 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 CNKSR3Q6P9H4 555 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 TMC6Q7Z403 805 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 HACE1Q8IYU2 909 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 UBR7Q8N806 425 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 HELQQ8TDG4 1101 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 PGBD4Q96DM1 585 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 CXCL16Q9H2A7 254 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 TMEM161AQ9NX61 479 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 GCNT4Q9P109 453 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 APEX2Q9UBZ4 518 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 ITGA11Q9UKX5 1188 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 UBQLN1Q9UMX0 589 aaKnown RBP8.8□□□□□ -1
NPHP3-204ENST00000469232 CNTN6Q9UQ52 1028 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 HES2Q9Y543 173 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 MICAL3Q7RTP6 2002 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 TRIP11Q15643 1979 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 COL4A6Q14031 1691 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 MEIS3P2A8K0S8 358 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 PIRO00625 290 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 MFAP3LO75121 409 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 ITGA4P13612 1032 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 TNNI1P19237 187 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 ATICP31939 592 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 YARSP54577 528 aaKnown RBP8.8□□□□□ -1
NPHP3-204ENST00000469232 OSTNP61366 133 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 CDK17Q00537 523 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 NCOA4Q13772 614 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 TMEM132DQ14C87 1099 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 MEA1Q16626 185 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 PHLDB3Q6NSJ2 640 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 ENOSF1Q7L5Y1 443 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 DRC7Q8IY82 874 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 LRRC52Q8N7C0 313 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 CACTINQ8WUQ7 758 aaKnown RBP8.8□□□□□ -1
NPHP3-204ENST00000469232 SCLYQ96I15 445 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 ANKRD36BP1Q96IX9 119 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 FAM81BQ96LP2 452 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 PANX2Q96RD6 677 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 CRACR2AQ9BSW2 395 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 TRIM6Q9C030 488 aaPredicted RBP8.8□□□□□ -1
NPHP3-204ENST00000469232 MTMR12Q9C0I1 747 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 AIPL1Q9NZN9 384 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 PLAGL2Q9UPG8 496 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 ABHD14A-ACY1A0A1B0GW23 586 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 ARL5CA6NH57 179 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 EFCAB14O75071 495 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 LRRN2O75325 713 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 OFD1O75665 1012 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 CST3P01034 146 aaPredicted RBP8.79□□□□□ -1
NPHP3-204ENST00000469232 FAM163BP0C2L3 166 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 PAX3P23760 479 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 AKAP5P24588 427 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 DSC1Q08554 894 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 PTPN21Q16825 1174 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 SGSM1Q2NKQ1 1148 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 SCARA3Q6AZY7 606 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 CREBRFQ8IUR6 639 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 TMEM139Q8IV31 216 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 CNGA4Q8IV77 575 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 CCDC150Q8NCX0 1101 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 NEK11Q8NG66 645 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 SHC3Q92529 594 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 ABHD8Q96I13 439 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 LRCH3Q96II8 777 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 KREMEN1Q96MU8 473 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 LSM14BQ9BX40 385 aaKnown RBP8.79□□□□□ -1
NPHP3-204ENST00000469232 STK33Q9BYT3 514 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 PPP1R12CQ9BZL4 782 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 GPR88Q9GZN0 384 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 NUCKS1Q9H1E3 243 aaKnown RBP8.79□□□□□ -1
NPHP3-204ENST00000469232 MMRN2Q9H8L6 949 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 RSAD1Q9HA92 442 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 APOBEC3GQ9HC16 384 aaKnown RBP8.79□□□□□ -1
NPHP3-204ENST00000469232 SLC38A7Q9NVC3 462 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 MIOSQ9NXC5 875 aa8.79□□□□□ -1
NPHP3-204ENST00000469232 AJAP1Q9UKB5 411 aaPredicted RBP8.79□□□□□ -1
NPHP3-204ENST00000469232 MKI67P46013 3256 aaKnown RBP8.79□□□□□ -1
NPHP3-204ENST00000469232 GOLGA6L6A8MZA4 724 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 AKR1B15C9JRZ8 316 aaPredicted RBP8.78□□□□□ -1
NPHP3-204ENST00000469232 PES1O00541 588 aaKnown RBP8.78□□□□□ -1
NPHP3-204ENST00000469232 XPOTO43592 962 aaKnown RBP8.78□□□□□ -1
NPHP3-204ENST00000469232 BAIAP3O94812 1187 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 TNNC2P02585 160 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 TMEM191BP0C7N4 346 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 ACTN1P12814 892 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 ACO1P21399 889 aaKnown RBP8.78□□□□□ -1
NPHP3-204ENST00000469232 CASP14P31944 242 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 RPL9P32969 192 aaKnown RBP8.78□□□□□ -1
NPHP3-204ENST00000469232 PRKCIP41743 596 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 AARSP49588 968 aaKnown RBP eCLIP8.78□□□□□ -1
NPHP3-204ENST00000469232 AFF1P51825 1210 aaKnown RBP8.78□□□□□ -1
NPHP3-204ENST00000469232 CCL23P55773 120 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 RBP5P82980 135 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 TFAMQ00059 246 aaKnown RBP8.78□□□□□ -1
NPHP3-204ENST00000469232 SOX4Q06945 474 aaPredicted RBP8.78□□□□□ -1
NPHP3-204ENST00000469232 GRIK3Q13003 919 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms