RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 FAM170BA6NMN3 283 aa17.57■□□□□ 0.4
COL7A1-204ENST00000462475 PLA2G4BP0C869 781 aa17.57■□□□□ 0.4
COL7A1-204ENST00000462475 SMTNP53814 917 aa17.57■□□□□ 0.4
COL7A1-204ENST00000462475 SPAG1Q07617 926 aa17.57■□□□□ 0.4
COL7A1-204ENST00000462475 MCL1Q07820 350 aa17.57■□□□□ 0.4
COL7A1-204ENST00000462475 TMEM119Q4V9L6 283 aa17.57■□□□□ 0.4
COL7A1-204ENST00000462475 TPGS2Q68CL5 300 aa17.57■□□□□ 0.4
COL7A1-204ENST00000462475 ZC3H14Q6PJT7 736 aaKnown RBP17.57■□□□□ 0.4
COL7A1-204ENST00000462475 ZPBP2Q6X784 338 aa17.57■□□□□ 0.4
COL7A1-204ENST00000462475 TPRG1Q6ZUI0 275 aa17.57■□□□□ 0.4
COL7A1-204ENST00000462475 DDX12PQ92771 950 aa17.57■□□□□ 0.4
COL7A1-204ENST00000462475 BCO2Q9BYV7 579 aa17.57■□□□□ 0.4
COL7A1-204ENST00000462475 SPATA6Q9NWH7 488 aaPredicted RBP17.57■□□□□ 0.4
COL7A1-204ENST00000462475 KIF3AQ9Y496 699 aa17.57■□□□□ 0.4
COL7A1-204ENST00000462475 CLDN3O15551 220 aa17.56■□□□□ 0.4
COL7A1-204ENST00000462475 TARSP26639 723 aaKnown RBP17.56■□□□□ 0.4
COL7A1-204ENST00000462475 ID4P47928 161 aa17.56■□□□□ 0.4
COL7A1-204ENST00000462475 ADCY1Q08828 1119 aa17.56■□□□□ 0.4
COL7A1-204ENST00000462475 GRM2Q14416 872 aa17.56■□□□□ 0.4
COL7A1-204ENST00000462475 RABEP1Q15276 862 aa17.56■□□□□ 0.4
COL7A1-204ENST00000462475 ARSHQ5FYA8 562 aa17.56■□□□□ 0.4
COL7A1-204ENST00000462475 PDZD4Q76G19 769 aaPredicted RBP17.56■□□□□ 0.4
COL7A1-204ENST00000462475 HS6ST3Q8IZP7 471 aa17.56■□□□□ 0.4
COL7A1-204ENST00000462475 APPL2Q8NEU8 664 aa17.56■□□□□ 0.4
COL7A1-204ENST00000462475 ELSPBP1Q96BH3 223 aa17.56■□□□□ 0.4
COL7A1-204ENST00000462475 CDK5RAP3Q96JB5 506 aa17.56■□□□□ 0.4
COL7A1-204ENST00000462475 OSBPL6Q9BZF3 934 aa17.56■□□□□ 0.4
COL7A1-204ENST00000462475 HEBP1Q9NRV9 189 aa17.56■□□□□ 0.4
COL7A1-204ENST00000462475 PCDHB8Q9UN66 801 aa17.56■□□□□ 0.4
COL7A1-204ENST00000462475 SHISA7A6NL88 538 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 MOSPD3O75425 235 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 CD2BP2O95400 341 aaKnown RBP17.55■□□□□ 0.4
COL7A1-204ENST00000462475 CENPBP07199 599 aaPredicted RBP17.55■□□□□ 0.4
COL7A1-204ENST00000462475 CPB1P15086 417 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 GJB2P29033 226 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 TNFSF9P41273 254 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 MATR3P43243 847 aaKnown RBP eCLIP17.55■□□□□ 0.4
COL7A1-204ENST00000462475 NCKAP1LP55160 1127 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 TWF1Q12792 350 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 FAM78AQ5JUQ0 283 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 RNF19BQ6ZMZ0 732 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 KCTD17Q8N5Z5 321 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 LRRC15Q8TF66 581 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 BICD1Q96G01 975 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 TMX3Q96JJ7 454 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 KCND2Q9NZV8 630 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 CEP72Q9P209 647 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 AFF4Q9UHB7 1163 aaKnown RBP17.55■□□□□ 0.4
COL7A1-204ENST00000462475 KCNG1Q9UIX4 513 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 TIMM13Q9Y5L4 95 aaPredicted RBP17.55■□□□□ 0.4
COL7A1-204ENST00000462475 GPR179Q6PRD1 2367 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 OTOGLQ3ZCN5 2332 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 CITO14578 2027 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 CACNA1IQ9P0X4 2223 aa17.55■□□□□ 0.4
COL7A1-204ENST00000462475 TTC26A0AVF1 554 aa17.54■□□□□ 0.4
COL7A1-204ENST00000462475 LAMTOR5O43504 91 aa17.54■□□□□ 0.4
COL7A1-204ENST00000462475 CLTAP09496 248 aa17.54■□□□□ 0.4
COL7A1-204ENST00000462475 LRPAP1P30533 357 aa17.54■□□□□ 0.4
COL7A1-204ENST00000462475 GUCY2FP51841 1108 aa17.54■□□□□ 0.4
COL7A1-204ENST00000462475 FOXK2Q01167 660 aa17.54■□□□□ 0.4
COL7A1-204ENST00000462475 ZBTB41Q5SVQ8 909 aa17.54■□□□□ 0.4
COL7A1-204ENST00000462475 KIF12Q96FN5 646 aa17.54■□□□□ 0.4
COL7A1-204ENST00000462475 ZSWIM3Q96MP5 696 aa17.54■□□□□ 0.4
COL7A1-204ENST00000462475 ASB16Q96NS5 453 aa17.54■□□□□ 0.4
COL7A1-204ENST00000462475 REEP2Q9BRK0 252 aa17.54■□□□□ 0.4
COL7A1-204ENST00000462475 PLEKHA5Q9HAU0 1116 aa17.54■□□□□ 0.4
COL7A1-204ENST00000462475 LARSQ9P2J5 1176 aaKnown RBP17.54■□□□□ 0.4
COL7A1-204ENST00000462475 MIA3Q5JRA6 1907 aa17.54■□□□□ 0.4
COL7A1-204ENST00000462475 CACNA1AO00555 2505 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 PDCD11Q14690 1871 aaKnown RBP17.53■□□□□ 0.4
COL7A1-204ENST00000462475 H3BQV1 296 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 M0QZQ0 153 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 ZNF197O14709 1029 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 FAM189A1O60320 539 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 MICAL2O94851 1124 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 VNN2O95498 520 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 OR4Q2P0C623 313 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 MYL4P12829 197 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 GJA1P17302 382 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 MARCKSP29966 332 aaPredicted RBP17.53■□□□□ 0.4
COL7A1-204ENST00000462475 AARSP49588 968 aaKnown RBP eCLIP17.53■□□□□ 0.4
COL7A1-204ENST00000462475 YWHAHQ04917 246 aaPredicted RBP17.53■□□□□ 0.4
COL7A1-204ENST00000462475 ZBTB6Q15916 424 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 CYP4A22Q5TCH4 519 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 ARL6IP4Q66PJ3 421 aaKnown RBP17.53■□□□□ 0.4
COL7A1-204ENST00000462475 IQCEQ6IPM2 695 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 HAUS6Q7Z4H7 955 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 GPBP1Q86WP2 473 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 KIAA2013Q8IYS2 634 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 ELMOD1Q8N336 334 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 SUMF1Q8NBK3 374 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 BEST2Q8NFU1 509 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 DNASE1L2Q92874 299 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 CLDN23Q96B33 292 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 HINFPQ9BQA5 517 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 ZFP14Q9HCL3 533 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 FBXO4Q9UKT5 387 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 UBQLN1Q9UMX0 589 aaKnown RBP17.53■□□□□ 0.4
COL7A1-204ENST00000462475 YIPF1Q9Y548 306 aa17.53■□□□□ 0.4
COL7A1-204ENST00000462475 NCANO14594 1321 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms