RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 BMP1P13497 986 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 PPP1R2P41236 205 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 BRCC3P46736 316 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 TAF6P49848 677 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 CYP2J2P51589 502 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 KCNQ1P51787 676 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 SNW1Q13573 536 aaKnown RBP13.03□□□□□ -0.32
SMPD4-212ENST00000451542 STIM1Q13586 685 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 SNRNP35Q16560 246 aaKnown RBP13.03□□□□□ -0.32
SMPD4-212ENST00000451542 RTP2Q5QGT7 225 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 ZNF280DQ6N043 979 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 GUF1Q8N442 669 aaKnown RBP13.03□□□□□ -0.32
SMPD4-212ENST00000451542 KIAA0895Q8NCT3 520 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 MSLNLQ96KJ4 702 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 SUSD3Q96L08 255 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 FBXL18Q96ME1 805 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 RIPOR3Q96MK2 946 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 NECTIN4Q96NY8 510 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 IKZF4Q9H2S9 585 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 SFXN1Q9H9B4 322 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 CLEC1BQ9P126 229 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 PRKAG3Q9UGI9 489 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 PCDHB8Q9UN66 801 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 FRMD4BQ9Y2L6 1034 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 BACE2Q9Y5Z0 518 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 CDH23Q9H251 3354 aa13.03□□□□□ -0.32
SMPD4-212ENST00000451542 GRXCR2A6NFK2 248 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 MEFVO15553 781 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-212ENST00000451542 MBTPS2O43462 519 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 GLP2RO95838 553 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 HOXD13P35453 343 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 CLCN4P51793 760 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 DLX2Q07687 328 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-212ENST00000451542 PNOCQ13519 176 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 KCNC3Q14003 757 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 CLUL1Q15846 466 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 DUOXA2Q1HG44 320 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 SV2CQ496J9 727 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 ATAT1Q5SQI0 421 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 LIN9Q5TKA1 542 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 C9orf57Q5W0N0 161 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 PRSS55Q6UWB4 352 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-212ENST00000451542 CYP26C1Q6V0L0 522 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 METTL23Q86XA0 190 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 SLC9A9Q8IVB4 645 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 SMRP1Q8NCR6 262 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 C3orf58Q8NDZ4 430 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-212ENST00000451542 LNX1Q8TBB1 728 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-212ENST00000451542 ADAMTS19Q8TE59 1207 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 SLC22A17Q8WUG5 538 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 B3GALT6Q96L58 329 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 TSG101Q99816 390 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 MTRRQ9UBK8 725 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 ITGA11Q9UKX5 1188 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 DSEQ9UL01 958 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 ANK1P16157 1881 aa13.02□□□□□ -0.33
SMPD4-212ENST00000451542 TCF20Q9UGU0 1960 aaKnown RBP13.01□□□□□ -0.33
SMPD4-212ENST00000451542 I3L4J1 428 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 PIRO00625 290 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 ODC1P11926 461 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 EPCAMP16422 314 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 TNNI1P19237 187 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 TKTP29401 623 aaKnown RBP13.01□□□□□ -0.33
SMPD4-212ENST00000451542 ELF1P32519 619 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 MTHFRP42898 656 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 AP3M2P53677 418 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 LILRA4P59901 499 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 RBP5P82980 135 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 YWHAHQ04917 246 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-212ENST00000451542 MYO1EQ12965 1108 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 SMAD2Q15796 467 aaKnown RBP13.01□□□□□ -0.33
SMPD4-212ENST00000451542 CTXN3Q4LDR2 81 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 VARS2Q5ST30 1063 aaKnown RBP13.01□□□□□ -0.33
SMPD4-212ENST00000451542 ZNF658Q5TYW1 1059 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-212ENST00000451542 RTL10Q7L3V2 364 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 PALB2Q86YC2 1186 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 CBWD2Q8IUF1 395 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 WDR49Q8IV35 697 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 GLYCTKQ8IVS8 523 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 RDH13Q8NBN7 331 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 TMEM174Q8WUU8 243 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 UHRF1Q96T88 793 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-212ENST00000451542 ADAM7Q9H2U9 754 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 PDE11AQ9HCR9 933 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 TRAF3IP3Q9Y228 551 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 PCDHA5Q9Y5H7 936 aa13.01□□□□□ -0.33
SMPD4-212ENST00000451542 TRANK1O15050 2925 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 ANO9A1A5B4 782 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 M0QZQ0 153 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 GADD45BO75293 160 aaPredicted RBP13□□□□□ -0.33
SMPD4-212ENST00000451542 NR3C1P04150 777 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 KRT19P08727 400 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 DLATP10515 647 aaKnown RBP13□□□□□ -0.33
SMPD4-212ENST00000451542 IL9P15248 144 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 TYMPP19971 482 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 OR1D2P34982 312 aa13□□□□□ -0.33
SMPD4-212ENST00000451542 AARSP49588 968 aaKnown RBP eCLIP13□□□□□ -0.33
SMPD4-212ENST00000451542 GUCY2FP51841 1108 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms