RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 GMCL1Q96IK5 515 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 PRMT6Q96LA8 375 aaPredicted RBP13.35□□□□□ -0.27
CPNE4-201ENST00000429747 ADPGKQ9BRR6 497 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 PSMC3IPQ9P2W1 217 aaPredicted RBP13.35□□□□□ -0.27
CPNE4-201ENST00000429747 PHTF1Q9UMS5 762 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 LMNAP02545 664 aaKnown RBP13.35□□□□□ -0.27
CPNE4-201ENST00000429747 NCF2P19878 526 aaPredicted RBP13.35□□□□□ -0.27
CPNE4-201ENST00000429747 MARSP56192 900 aaKnown RBP13.35□□□□□ -0.27
CPNE4-201ENST00000429747 SOX10P56693 466 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 ELF3P78545 371 aaPredicted RBP13.35□□□□□ -0.27
CPNE4-201ENST00000429747 NFX1Q12986 1120 aaKnown RBP13.35□□□□□ -0.27
CPNE4-201ENST00000429747 APOBEC3HQ6NTF7 200 aaKnown RBP13.35□□□□□ -0.27
CPNE4-201ENST00000429747 CCNYQ8ND76 341 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 NSUN6Q8TEA1 469 aaKnown RBP13.35□□□□□ -0.27
CPNE4-201ENST00000429747 SEZ6Q53EL9 994 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 ATG16L1Q676U5 607 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 ARMC2Q8NEN0 867 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 ZDHHC15Q96MV8 337 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 BATF3Q9NR55 127 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 CHMP2BQ9UQN3 213 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 GAKO14976 1311 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 ZWINTO95229 277 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 KRT7P08729 469 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 KRT4P19013 534 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 CENPCQ03188 943 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 NCOA4Q13772 614 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 AUHQ13825 339 aaKnown RBP13.34□□□□□ -0.27
CPNE4-201ENST00000429747 VPS72Q15906 364 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 GEN1Q17RS7 908 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 TAAR1Q96RJ0 339 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 MIS12Q9H081 205 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 MARCOQ9UEW3 520 aaPredicted RBP13.34□□□□□ -0.27
CPNE4-201ENST00000429747 KIF1AQ12756 1690 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 SPECC1L-ADORA2AF8WAN1 911 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 DGAT1O75907 488 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 EPHB1P54762 984 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 LRRC57Q8N9N7 239 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 ETNPPLQ8TBG4 499 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 PRCCQ92733 491 aaPredicted RBP13.34□□□□□ -0.27
CPNE4-201ENST00000429747 TMEM39BQ9GZU3 492 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 KCNQ5Q9NR82 932 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 ANGPTL2Q9UKU9 493 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 KRT3P12035 628 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 ABCD1P33897 745 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 NPTX2P47972 431 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 EIF3EP60228 445 aaKnown RBP13.34□□□□□ -0.27
CPNE4-201ENST00000429747 KDSRQ06136 332 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 C1orf146Q5VVC0 180 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 SPOPLQ6IQ16 392 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 C1orf228Q6PIY5 440 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 PALB2Q86YC2 1186 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 DEPDC1BQ8WUY9 529 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 TSSK1BQ9BXA7 367 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 PCDHAC2Q9Y5I4 1007 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 KCPQ6ZWJ8 1503 aa13.34□□□□□ -0.27
CPNE4-201ENST00000429747 PIK3R2O00459 728 aa13.33□□□□□ -0.27
CPNE4-201ENST00000429747 ALDH5A1P51649 535 aaPredicted RBP13.33□□□□□ -0.27
CPNE4-201ENST00000429747 RPS6P62753 249 aaKnown RBP13.33□□□□□ -0.27
CPNE4-201ENST00000429747 FOXR2Q6PJQ5 311 aa13.33□□□□□ -0.27
CPNE4-201ENST00000429747 CERS5Q8N5B7 392 aa13.33□□□□□ -0.27
CPNE4-201ENST00000429747 FEZF2Q8TBJ5 459 aa13.33□□□□□ -0.27
CPNE4-201ENST00000429747 EPS8L1Q8TE68 723 aa13.33□□□□□ -0.27
CPNE4-201ENST00000429747 TARS2Q9BW92 718 aaKnown RBP13.33□□□□□ -0.27
CPNE4-201ENST00000429747 BCAS3Q9H6U6 928 aa13.33□□□□□ -0.27
CPNE4-201ENST00000429747 ZNF277Q9NRM2 450 aaPredicted RBP13.33□□□□□ -0.27
CPNE4-201ENST00000429747 USP20Q9Y2K6 914 aa13.33□□□□□ -0.27
CPNE4-201ENST00000429747 PCDHA3Q9Y5H8 950 aa13.33□□□□□ -0.27
CPNE4-201ENST00000429747 SNX3O60493 162 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 CST8O60676 142 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 CPA2P48052 419 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 RARRES1P49788 294 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 CDH6P55285 790 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 PPP2R5CQ13362 524 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 TFDP2Q14188 446 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 CNGA2Q16280 664 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 MAPK6Q16659 721 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 TKFCQ3LXA3 575 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 HYIQ5T013 277 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 SESTD1Q86VW0 696 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 PWWP2AQ96N64 755 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 SMYD2Q9NRG4 433 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 LRRC4BQ9NT99 713 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 GGA2Q9UJY4 613 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 STRIP2Q9ULQ0 834 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 NFIBO00712 420 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 CDC25CP30307 473 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 PGM1P36871 562 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 KCNJ2P63252 427 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 SWT1Q5T5J6 900 aaKnown RBP13.33□□□□□ -0.28
CPNE4-201ENST00000429747 ZNF572Q7Z3I7 529 aaPredicted RBP13.33□□□□□ -0.28
CPNE4-201ENST00000429747 NUDCD3Q8IVD9 361 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 SCYL1Q96KG9 808 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 MAGEB18Q96M61 343 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 TIPINQ9BVW5 301 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 OSBPL7Q9BZF2 842 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 KLC2Q9H0B6 622 aa13.33□□□□□ -0.28
CPNE4-201ENST00000429747 RPF1Q9H9Y2 349 aaKnown RBP13.33□□□□□ -0.28
CPNE4-201ENST00000429747 JPH1Q9HDC5 661 aaPredicted RBP13.33□□□□□ -0.28
CPNE4-201ENST00000429747 DDX56Q9NY93 547 aaKnown RBP13.33□□□□□ -0.28
CPNE4-201ENST00000429747 FRMPD4Q14CM0 1322 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms