RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 VAV2P52735 878 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 DSC2Q02487 901 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 TLE1Q04724 770 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 MPP3Q13368 585 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 IL10RAQ13651 578 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 ODF1Q14990 250 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 PRR16Q569H4 304 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 SP5Q6BEB4 398 aaPredicted RBP5.38□□□□□ -1.55
LINC00397-201ENST00000422074 PPP4R3AQ6IN85 833 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 FOXR2Q6PJQ5 311 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 MTMR8Q96EF0 704 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 TMX3Q96JJ7 454 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 KRTAP17-1Q9BYP8 105 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 ASPSCR1Q9BZE9 553 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 JKAMPQ9P055 326 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 SERPINB13Q9UIV8 391 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 CFAP20Q9Y6A4 193 aaKnown RBP5.38□□□□□ -1.55
LINC00397-201ENST00000422074 CDHR4A6H8M9 788 aa5.37□□□□□ -1.55
LINC00397-201ENST00000422074 KIAA0391O15091 583 aaKnown RBP5.37□□□□□ -1.55
LINC00397-201ENST00000422074 GRM6O15303 877 aa5.37□□□□□ -1.55
LINC00397-201ENST00000422074 XPOTO43592 962 aaKnown RBP5.37□□□□□ -1.55
LINC00397-201ENST00000422074 ZRANB2O95218 330 aaKnown RBP eCLIP5.37□□□□□ -1.55
LINC00397-201ENST00000422074 ITGAMP11215 1152 aa5.37□□□□□ -1.55
LINC00397-201ENST00000422074 CLK3P49761 638 aaKnown RBP5.37□□□□□ -1.55
LINC00397-201ENST00000422074 FXR1P51114 621 aaKnown RBP eCLIP5.37□□□□□ -1.55
LINC00397-201ENST00000422074 EVA1CP58658 441 aa5.37□□□□□ -1.55
LINC00397-201ENST00000422074 KIF23Q02241 960 aaPredicted RBP5.37□□□□□ -1.55
LINC00397-201ENST00000422074 FAM50AQ14320 339 aaKnown RBP5.37□□□□□ -1.55
LINC00397-201ENST00000422074 EFCAB2Q5VUJ9 269 aa5.37□□□□□ -1.55
LINC00397-201ENST00000422074 RSPH3Q86UC2 560 aa5.37□□□□□ -1.55
LINC00397-201ENST00000422074 LNX2Q8N448 690 aa5.37□□□□□ -1.55
LINC00397-201ENST00000422074 ZCRB1Q8TBF4 217 aaKnown RBP5.37□□□□□ -1.55
LINC00397-201ENST00000422074 RNF31Q96EP0 1072 aa5.37□□□□□ -1.55
LINC00397-201ENST00000422074 UNKLQ9H9P5 680 aaKnown RBP5.37□□□□□ -1.55
LINC00397-201ENST00000422074 A0A1W2PS29 197 aa5.36□□□□□ -1.55
LINC00397-201ENST00000422074 ZAR1LA6NP61 321 aa5.36□□□□□ -1.55
LINC00397-201ENST00000422074 SBK3P0C264 359 aa5.36□□□□□ -1.55
LINC00397-201ENST00000422074 FCER1AP12319 257 aa5.36□□□□□ -1.55
LINC00397-201ENST00000422074 FBLP22087 321 aaKnown RBP5.36□□□□□ -1.55
LINC00397-201ENST00000422074 ZNF280AP59817 542 aaPredicted RBP5.36□□□□□ -1.55
LINC00397-201ENST00000422074 PTPN21Q16825 1174 aa5.36□□□□□ -1.55
LINC00397-201ENST00000422074 TTC7BQ86TV6 843 aa5.36□□□□□ -1.55
LINC00397-201ENST00000422074 COLGALT2Q8IYK4 626 aa5.36□□□□□ -1.55
LINC00397-201ENST00000422074 TBC1D15Q8TC07 691 aa5.36□□□□□ -1.55
LINC00397-201ENST00000422074 CAVIN3Q969G5 261 aa5.36□□□□□ -1.55
LINC00397-201ENST00000422074 Q96MF0 132 aa5.36□□□□□ -1.55
LINC00397-201ENST00000422074 CRAMP1Q96RY5 1269 aa5.36□□□□□ -1.55
LINC00397-201ENST00000422074 TBCCD1Q9NVR7 557 aa5.36□□□□□ -1.55
LINC00397-201ENST00000422074 KAT6AQ92794 2004 aa5.35□□□□□ -1.55
LINC00397-201ENST00000422074 RPLP2P05387 115 aaKnown RBP5.35□□□□□ -1.55
LINC00397-201ENST00000422074 FLYWCH1Q4VC44 716 aa5.35□□□□□ -1.55
LINC00397-201ENST00000422074 UTP14CQ5TAP6 766 aaKnown RBP5.35□□□□□ -1.55
LINC00397-201ENST00000422074 Q6ZNX1 250 aa5.35□□□□□ -1.55
LINC00397-201ENST00000422074 ZNF365Q70YC5 407 aa5.35□□□□□ -1.55
LINC00397-201ENST00000422074 TMPRSS9Q7Z410 1059 aa5.35□□□□□ -1.55
LINC00397-201ENST00000422074 PNMA8AQ86V59 439 aaPredicted RBP5.35□□□□□ -1.55
LINC00397-201ENST00000422074 PRR18Q8N4B5 295 aa5.35□□□□□ -1.55
LINC00397-201ENST00000422074 RAB24Q969Q5 203 aa5.35□□□□□ -1.55
LINC00397-201ENST00000422074 CLPTM1LQ96KA5 538 aa5.35□□□□□ -1.55
LINC00397-201ENST00000422074 PRDM13Q9H4Q3 707 aa5.35□□□□□ -1.55
LINC00397-201ENST00000422074 SIDT1Q9NXL6 827 aaKnown RBP5.35□□□□□ -1.55
LINC00397-201ENST00000422074 VSX1Q9NZR4 365 aaPredicted RBP5.35□□□□□ -1.55
LINC00397-201ENST00000422074 MTO1Q9Y2Z2 717 aaKnown RBP5.35□□□□□ -1.55
LINC00397-201ENST00000422074 NEU2Q9Y3R4 380 aa5.35□□□□□ -1.55
LINC00397-201ENST00000422074 SALL3Q9BXA9 1300 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 NT5C1B-RDH14C9J2C7 533 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 PPFIA2O75334 1257 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 AGFG2O95081 481 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 NUDT3O95989 172 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 ANXA1P04083 346 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 RECQLP46063 649 aaPredicted RBP5.34□□□□□ -1.55
LINC00397-201ENST00000422074 POU6F2P78424 691 aaPredicted RBP5.34□□□□□ -1.55
LINC00397-201ENST00000422074 ZNF169Q14929 603 aaPredicted RBP5.34□□□□□ -1.55
LINC00397-201ENST00000422074 TMEM240Q5SV17 173 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 KIAA0895LQ68EN5 471 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 FAM98AQ8NCA5 519 aaKnown RBP5.34□□□□□ -1.55
LINC00397-201ENST00000422074 SIMC1Q8NDZ2 872 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 KAT5Q92993 513 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 KLHL32Q96NJ5 620 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 RIOX1Q9H6W3 641 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 FOXJ2Q9P0K8 574 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 CTTNBP2NLQ9P2B4 639 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 ZNHIT2Q9UHR6 403 aa5.34□□□□□ -1.55
LINC00397-201ENST00000422074 PRAMEF33A0A0G2JMD5 474 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 KIAA0355O15063 1070 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 PROM1O43490 865 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 PRAMEF10O60809 474 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 CD1AP06126 327 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 SRGNP10124 158 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 KCNA2P16389 499 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 MALP21145 153 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 RARRES1P49788 294 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 SNAPC2Q13487 334 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 PTPROQ16827 1216 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 ERCC6LQ2NKX8 1250 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 GADL1Q6ZQY3 521 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 PDSS2Q86YH6 399 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 PDLIM2Q96JY6 352 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 BBC3Q96PG8 261 aaPredicted RBP5.33□□□□□ -1.56
LINC00397-201ENST00000422074 TLR10Q9BXR5 811 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms