RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 USP25Q9UHP3 1055 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 C5orf42Q9H799 3197 aa15.81■□□□□ 0.12
SEC13-208ENST00000397109 CCDC195A0A1B0GUA6 201 aa15.8■□□□□ 0.12
SEC13-208ENST00000397109 TISP43B9A030 160 aa15.8■□□□□ 0.12
SEC13-208ENST00000397109 H7C4K7 107 aa15.8■□□□□ 0.12
SEC13-208ENST00000397109 IGFBP6P24592 240 aaPredicted RBP15.8■□□□□ 0.12
SEC13-208ENST00000397109 TKTP29401 623 aaKnown RBP15.8■□□□□ 0.12
SEC13-208ENST00000397109 ADSSP30520 456 aa15.8■□□□□ 0.12
SEC13-208ENST00000397109 CASP5P51878 434 aa15.8■□□□□ 0.12
SEC13-208ENST00000397109 SPAG1Q07617 926 aa15.8■□□□□ 0.12
SEC13-208ENST00000397109 KCNA1Q09470 495 aa15.8■□□□□ 0.12
SEC13-208ENST00000397109 RAB33AQ14088 237 aa15.8■□□□□ 0.12
SEC13-208ENST00000397109 SPATA1Q5VX52 437 aa15.8■□□□□ 0.12
SEC13-208ENST00000397109 KANK3Q6NY19 840 aa15.8■□□□□ 0.12
SEC13-208ENST00000397109 UNC13DQ70J99 1090 aa15.8■□□□□ 0.12
SEC13-208ENST00000397109 APPL2Q8NEU8 664 aa15.8■□□□□ 0.12
SEC13-208ENST00000397109 USTQ9Y2C2 406 aa15.8■□□□□ 0.12
SEC13-208ENST00000397109 PLXNA3P51805 1871 aa15.8■□□□□ 0.12
SEC13-208ENST00000397109 PVALEFA0A1B0GWK0 134 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 I3L4J1 428 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 KIAA0391O15091 583 aaKnown RBP15.79■□□□□ 0.12
SEC13-208ENST00000397109 EIF3DO15371 548 aaKnown RBP eCLIP15.79■□□□□ 0.12
SEC13-208ENST00000397109 PRPF6O94906 941 aaKnown RBP15.79■□□□□ 0.12
SEC13-208ENST00000397109 IL18RAPO95256 599 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 PAPLNO95428 1278 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 WEE2P0C1S8 567 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 SLFN14P0C7P3 912 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 SPATA31D3P0C874 917 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 OR1D2P34982 312 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 TMEM132DQ14C87 1099 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 FAM26FQ5R3K3 315 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 JADE1Q6IE81 842 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 SPATA31D4Q6ZUB0 917 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 RTL10Q7L3V2 364 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 CDH22Q9UJ99 828 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 FBXW11Q9UKB1 542 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 C2CD2Q9Y426 696 aa15.79■□□□□ 0.12
SEC13-208ENST00000397109 GOLGA6L4A6NEF3 574 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 ZMYND10O75800 440 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 PFKFB1P16118 471 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 VARS2Q5ST30 1063 aaKnown RBP15.78■□□□□ 0.12
SEC13-208ENST00000397109 CCDC183Q5T5S1 534 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 LIN9Q5TKA1 542 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 LRSAM1Q6UWE0 723 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 CRELD2Q6UXH1 353 aaPredicted RBP15.78■□□□□ 0.12
SEC13-208ENST00000397109 CCDC149Q6ZUS6 474 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 NT5DC4Q86YG4 428 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 PLCD3Q8N3E9 789 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 FGFBP2Q9BYJ0 223 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 IKZF4Q9H2S9 585 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 TMEM63CQ9P1W3 806 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 SERTAD1Q9UHV2 236 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 PCDHB8Q9UN66 801 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 GPR37L1O60883 481 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 GADD45BO75293 160 aaPredicted RBP15.78■□□□□ 0.12
SEC13-208ENST00000397109 RFPL2O75678 378 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 HNRNPA1P09651 372 aaKnown RBP eCLIP15.78■□□□□ 0.12
SEC13-208ENST00000397109 AFMP43652 599 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 MRPL58Q14197 206 aaKnown RBP15.78■□□□□ 0.12
SEC13-208ENST00000397109 UVSSAQ2YD98 709 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 TMEM31Q5JXX7 168 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 SLC8B1Q6J4K2 584 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 ARMCX5Q6P1M9 558 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 OTOP3Q7RTS5 596 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 FSIP1Q8NA03 581 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 TDRD5Q8NAT2 981 aaKnown RBP15.78■□□□□ 0.12
SEC13-208ENST00000397109 ZNF507Q8TCN5 953 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 SMG7Q92540 1137 aaKnown RBP15.78■□□□□ 0.12
SEC13-208ENST00000397109 ACSF2Q96CM8 615 aaPredicted RBP15.78■□□□□ 0.12
SEC13-208ENST00000397109 FAM213AQ9BRX8 229 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 PRKD2Q9BZL6 878 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 GOLPH3LQ9H4A5 285 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 PIDD1Q9HB75 910 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 MUTYHQ9UIF7 546 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 CDY1Q9Y6F8 540 aa15.78■□□□□ 0.12
SEC13-208ENST00000397109 UBE4BO95155 1302 aa15.77■□□□□ 0.12
SEC13-208ENST00000397109 A0A1B0GVL5 298 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 ARHGEF37A1IGU5 675 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 M0QZQ0 153 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 ADAM12O43184 909 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 ACTN4O43707 911 aaKnown RBP15.77■□□□□ 0.11
SEC13-208ENST00000397109 EXTL3O43909 919 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 MYL1P05976 194 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 NFICP08651 508 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 HOXA9P31269 272 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 AARSP49588 968 aaKnown RBP eCLIP15.77■□□□□ 0.11
SEC13-208ENST00000397109 EHHADHQ08426 723 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 PPM1LQ5SGD2 360 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 ZNF280DQ6N043 979 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 EPM2AIP1Q7L775 607 aaPredicted RBP15.77■□□□□ 0.11
SEC13-208ENST00000397109 BRSK2Q8IWQ3 736 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 ZDHHC14Q8IZN3 488 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 ENGASEQ8NFI3 743 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 HPS3Q969F9 1004 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 OXCT2Q9BYC2 517 aaPredicted RBP15.77■□□□□ 0.11
SEC13-208ENST00000397109 BLZF1Q9H2G9 400 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 GRPEL1Q9HAV7 217 aa15.77■□□□□ 0.11
SEC13-208ENST00000397109 WDR6Q9NNW5 1121 aaKnown RBP15.77■□□□□ 0.11
SEC13-208ENST00000397109 MYO10Q9HD67 2058 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 ANK1P16157 1881 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms