RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 PLA2G4AP47712 749 aa7.57□□□□□ -1.2
TGFBR3-202ENST00000370399 YWHAGP61981 247 aaKnown RBP eCLIP7.57□□□□□ -1.2
TGFBR3-202ENST00000370399 CUL1Q13616 776 aa7.57□□□□□ -1.2
TGFBR3-202ENST00000370399 ABHD15Q6UXT9 468 aa7.57□□□□□ -1.2
TGFBR3-202ENST00000370399 CCDC121Q6ZUS5 278 aa7.57□□□□□ -1.2
TGFBR3-202ENST00000370399 OR5B17Q8NGF7 314 aa7.57□□□□□ -1.2
TGFBR3-202ENST00000370399 HES2Q9Y543 173 aa7.57□□□□□ -1.2
TGFBR3-202ENST00000370399 MCF2LO15068 1137 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 DHX15O43143 795 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 LCP1P13796 627 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 SNRPFP62306 86 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 ZBTB16Q05516 673 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 CAPSQ13938 189 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 DAB2IPQ5VWQ8 1189 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 HGSNATQ68CP4 663 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 ACAD10Q6JQN1 1059 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 CCDC91Q7Z6B0 441 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 PALB2Q86YC2 1186 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 CCDC13Q8IYE1 715 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 SIX6OS1Q8N1H7 587 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 EMC1Q8N766 993 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 TMC2Q8TDI7 906 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 SEMA4DQ92854 862 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 SENP7Q9BQF6 1050 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 TTYH3Q9C0H2 523 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 CISHQ9NSE2 258 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 UVRAGQ9P2Y5 699 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 GTF3C4Q9UKN8 822 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 TELO2Q9Y4R8 837 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 ASAP2O43150 1006 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 EDIL3O43854 480 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 KRT10P13645 584 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 NR1D1P20393 614 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 BEX3Q00994 111 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 ZKSCAN8Q15776 578 aaPredicted RBP7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 PAN2Q504Q3 1202 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 COBLL1Q53SF7 1204 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 ZBTB41Q5SVQ8 909 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 MEI1Q5TIA1 1274 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 LLGL2Q6P1M3 1020 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 MPZL3Q6UWV2 235 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 TAOK1Q7L7X3 1001 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 L1RE1Q9UN81 338 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 PODXLO00592 558 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 RASGRF2O14827 1237 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 SASH3O75995 380 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 FARP2O94887 1054 aaPredicted RBP7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 TJP3O95049 919 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 GNAT1P11488 350 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 STX2P32856 288 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 GCLCP48506 637 aaPredicted RBP7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 RBP5P82980 135 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 SP2Q02086 613 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 PPIL2Q13356 520 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 MYBPC2Q14324 1141 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 BMT2Q1RMZ1 405 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 CCDC38Q502W7 563 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 TEX2Q8IWB9 1127 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 ANKS4BQ8N8V4 417 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 LNX1Q8TBB1 728 aaPredicted RBP7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 EPS8L1Q8TE68 723 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 KRT35Q92764 455 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 PKNOX2Q96KN3 472 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 COL4A1P02462 1669 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 TARSL2A2RTX5 802 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 SOWAHBA6NEL2 793 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 CLTAP09496 248 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 MAPTP10636 758 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 RALAP11233 206 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 PDGFRAP16234 1089 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 AKAP5P24588 427 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 SDC4P31431 198 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 CDH6P55285 790 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 KRT17Q04695 432 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 CELF3Q5SZQ8 465 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 EEF1DP3Q658K8 133 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 TRIM72Q6ZMU5 477 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 NSRP1Q9H0G5 558 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 XPNPEP1Q9NQW7 623 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 KCND1Q9NSA2 647 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 IP6K2Q9UHH9 426 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 PCDHA2Q9Y5H9 948 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 MYH7P12883 1935 aa7.56□□□□□ -1.2
TGFBR3-202ENST00000370399 CACNA1SQ13698 1873 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 SPDYE5A6NIY4 337 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 LGALS2P05162 132 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 ANXA13P27216 316 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 HNRNPH3P31942 346 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 CHRNA3P32297 505 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 AP3M2P53677 418 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 GPS1Q13098 491 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 MAPK7Q13164 816 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 ALS2CLQ60I27 953 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 DNAJB3Q8WWF6 145 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 ZNF606Q8WXB4 792 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 OSBPL8Q9BZF1 889 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 TXNRD2Q9NNW7 524 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 ZNF446Q9NWS9 450 aa7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-202ENST00000370399 RASSF10A6NK89 507 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms