RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SPATA31D3P0C874 917 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 TKTP29401 623 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 KCNA1Q09470 495 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 PSMD2Q13200 908 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 SURF1Q15526 300 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 ZBTB6Q15916 424 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 PPM1LQ5SGD2 360 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 ZNF280DQ6N043 979 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 KANK3Q6NY19 840 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 SPATA31D4Q6ZUB0 917 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 RTL10Q7L3V2 364 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 GPD1LQ8N335 351 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 PLCD3Q8N3E9 789 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 FSIP1Q8NA03 581 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 C3orf58Q8NDZ4 430 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 SMG7Q92540 1137 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 CLSTN3Q9BQT9 956 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 RBAKQ9NYW8 714 aaPredicted RBP17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 CGNQ9P2M7 1197 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 PCDHB8Q9UN66 801 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 CDY1Q9Y6F8 540 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 ZNF233A6NK53 670 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 LOC730098B7Z3J9 87 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 DCXO43602 365 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 XYLBO75191 536 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 ADSSP30520 456 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 YWHAHQ04917 246 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 CUL4BQ13620 913 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 RAB33AQ14088 237 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 UVSSAQ2YD98 709 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 CTXN3Q4LDR2 81 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 VARS2Q5ST30 1063 aaKnown RBP17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 LILRA6Q6PI73 481 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 OTOP3Q7RTS5 596 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 TDRD5Q8NAT2 981 aaKnown RBP17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 GOLGA5Q8TBA6 731 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 ZNF507Q8TCN5 953 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 SAAL1Q96ER3 474 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 PAGE5Q96GU1 130 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 RHOBTB2Q9BYZ6 727 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 PCIF1Q9H4Z3 704 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 POMKQ9H5K3 350 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 CD320Q9NPF0 282 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 DPP3Q9NY33 737 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 USTQ9Y2C2 406 aa17.08■□□□□ 0.32
TSPAN4-201ENST00000346501 MEFVO15553 781 aaPredicted RBP17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 ACTN4O43707 911 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 ZMYND10O75800 440 aa17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 NFICP08651 508 aa17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 HNRNPA1P09651 372 aaKnown RBP eCLIP17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 WEE2P0C1S8 567 aa17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 ODC1P11926 461 aa17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 ARPP19P56211 112 aa17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 TFAMQ00059 246 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 METTL23Q86XA0 190 aa17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 RNF135Q8IUD6 432 aa17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 BRSK2Q8IWQ3 736 aa17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 HPS3Q969F9 1004 aa17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 ZNF560Q96MR9 790 aa17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 PRKD2Q9BZL6 878 aa17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 SLC39A2Q9NP94 309 aa17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 FBXW11Q9UKB1 542 aa17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 HPSEQ9Y251 543 aa17.07■□□□□ 0.32
TSPAN4-201ENST00000346501 GOLGA8IPA6NC78 632 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 GOLGA8JA6NMD2 632 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 PI4K2BG5E9Z4 385 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 C8AP07357 584 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 TMEM191BP0C7N4 346 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 SP100P23497 879 aaPredicted RBP17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 ANP32AP39687 249 aaKnown RBP17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 PNPLA4P41247 253 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 TAF6P49848 677 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 NDUFA8P51970 172 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 SV2CQ496J9 727 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 C9orf57Q5W0N0 161 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 CD300LGQ6UXG3 332 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 NELFCDQ8IXH7 590 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 ZNF461Q8TAF7 563 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 ANKRD36BP1Q96IX9 119 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 CBWD1Q9BRT8 395 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 IKZF4Q9H2S9 585 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 GDPD2Q9HCC8 539 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 HOOK1Q9UJC3 728 aaKnown RBP17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 DSEQ9UL01 958 aa17.06■□□□□ 0.32
TSPAN4-201ENST00000346501 FAM237AA0A1B0GTK4 181 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 M0QZQ0 153 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 PRRG1O14668 218 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 RFPL2O75678 378 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 TNNC2P02585 160 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 CPB1P15086 417 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 CASP1P29466 404 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 HOXA9P31269 272 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 KNOP1Q1ED39 458 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 TPGS2Q68CL5 300 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 SLC8B1Q6J4K2 584 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 CRELD2Q6UXH1 353 aaPredicted RBP17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 EPM2AIP1Q7L775 607 aaPredicted RBP17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 GRAMD1CQ8IYS0 662 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 CHAMP1Q96JM3 812 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 FNBP1Q96RU3 617 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms