RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 FBXL13Q8NEE6 735 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 EME1Q96AY2 570 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 MRPL9Q9BYD2 267 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 PLGRKTQ9HBL7 147 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 BTBD3Q9Y2F9 522 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 PCDHA5Q9Y5H7 936 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 CCDC22O60826 627 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 CCNDBP1O95273 360 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 PNPP00491 289 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 PRKACAP17612 351 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 ERCC2P18074 760 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 MLLT1Q03111 559 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 C10orf76Q5T2E6 689 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 PTRHD1Q6GMV3 140 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 FRMD5Q7Z6J6 570 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 TMC2Q8TDI7 906 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 SLC9A6Q92581 669 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 SMARCAL1Q9NZC9 954 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 MLH3Q9UHC1 1453 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 CHD5Q8TDI0 1954 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 OTOFQ9HC10 1997 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 KCNJ18B7U540 433 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 ARHGDIBP52566 201 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 PSMC5P62195 406 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 CAMK1Q14012 370 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 KCNJ12Q14500 433 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 DGLUCYQ7Z3D6 616 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 FGD2Q7Z6J4 655 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 RHOT2Q8IXI1 618 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 SGSM3Q96HU1 749 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 FBRSL1Q9HCM7 1045 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 SCN3BQ9NY72 215 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 CORO1CQ9ULV4 474 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 SAR1BQ9Y6B6 198 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 SPDYE5A6NIY4 337 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 IL18RAPO95256 599 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 NRG3P56975 720 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 TIMM50Q3ZCQ8 353 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 CDC37L1Q7L3B6 337 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 FAM160A2Q8N612 972 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 POMGNT2Q8NAT1 580 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 REPS2Q8NFH8 660 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 RHBDF1Q96CC6 855 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 CALN1Q9BXU9 219 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 ASPSCR1Q9BZE9 553 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZNF225Q9UK10 706 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 CLRN2A0PK11 232 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZSCAN9O15535 394 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 SUPT7LO94864 414 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 MAP3K6O95382 1288 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 IFNA7P01567 189 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 LDHBP07195 334 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 CSF2RAP15509 400 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 CMPK1P30085 196 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 SOX11P35716 441 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 PRIM2P49643 509 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 REEP5Q00765 189 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 TRIP10Q15642 601 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 TBC1D9BQ66K14 1250 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 THAP5Q7Z6K1 395 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZBTB46Q86UZ6 589 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 DRAXINQ8NBI3 349 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 SLC39A1Q9NY26 324 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 GSTA1P08263 222 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 KRT33BQ14525 404 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 FOXRED2Q8IWF2 684 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 OR5J2Q8NH18 312 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 NUSAP1Q9BXS6 441 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 VRTNQ9H8Y1 702 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 KLHL3Q9UH77 587 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 USP47Q96K76 1375 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 A0A0X1KG70 313 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 BAG6P46379 1132 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 CABP4P57796 275 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 DSG2Q14126 1118 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 TRIP13Q15645 432 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 PDZK1Q5T2W1 519 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 SLC9C2Q5TAH2 1124 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 TERB2Q8NHR7 220 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 COL26A1Q96A83 441 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 MAP3K14Q99558 947 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 SLC8A2Q9UPR5 921 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 PA2G4Q9UQ80 394 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 TLDC2A0PJX2 215 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 NOTOA8MTQ0 251 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 MYBP10242 640 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 DCKP27707 260 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 PIK3R1P27986 724 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 ACADLP28330 430 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 RAD23BP54727 409 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 TRIQKQ629K1 86 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 ARHGEF1Q92888 912 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 MALT1Q9UDY8 824 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 MGAT4AQ9UM21 535 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 SNX13Q9Y5W8 968 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 A6NJR5 290 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 SPDYE16A6NNV3 312 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 RNF103O00237 685 aa6.34□□□□□ -1.39
CDC42BPA-201ENST00000334218 GLRX3O76003 335 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms