RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 GRAP2O75791 330 aa13.02□□□□□ -0.32
SLX4-201ENST00000294008 OR6A2O95222 327 aa13.02□□□□□ -0.32
SLX4-201ENST00000294008 CALB1P05937 261 aa13.02□□□□□ -0.32
SLX4-201ENST00000294008 STARD3Q14849 445 aa13.02□□□□□ -0.32
SLX4-201ENST00000294008 TTC13Q8NBP0 860 aa13.02□□□□□ -0.32
SLX4-201ENST00000294008 BRIP1Q9BX63 1249 aa13.02□□□□□ -0.32
SLX4-201ENST00000294008 ACSL4O60488 711 aa13.02□□□□□ -0.32
SLX4-201ENST00000294008 KLHL38Q2WGJ6 581 aa13.02□□□□□ -0.32
SLX4-201ENST00000294008 CDKL3Q8IVW4 592 aaPredicted RBP13.02□□□□□ -0.32
SLX4-201ENST00000294008 TASP1Q9H6P5 420 aa13.02□□□□□ -0.32
SLX4-201ENST00000294008 POLE3Q9NRF9 147 aa13.02□□□□□ -0.32
SLX4-201ENST00000294008 RNF146Q9NTX7 359 aa13.02□□□□□ -0.32
SLX4-201ENST00000294008 HDAC6Q9UBN7 1215 aa13.02□□□□□ -0.32
SLX4-201ENST00000294008 AVPR1AP37288 418 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 E2F4Q16254 413 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 DEFB128Q7Z7B8 93 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 SCAIQ8N9R8 606 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 NEK7Q8TDX7 302 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 LEMD3Q9Y2U8 911 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 NCAPD3P42695 1498 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 NEURL1BA8MQ27 555 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 RHOBTB1O94844 696 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 EGFRP00533 1210 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 ASS1P00966 412 aaKnown RBP13.02□□□□□ -0.33
SLX4-201ENST00000294008 ADCY2Q08462 1091 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 CNGA3Q16281 694 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 CALML6Q8TD86 181 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 CINPQ9BW66 212 aaPredicted RBP13.02□□□□□ -0.33
SLX4-201ENST00000294008 RHOBTB2Q9BYZ6 727 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 CAAP1Q9H8G2 361 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 C3orf70A6NLC5 250 aaPredicted RBP13.02□□□□□ -0.33
SLX4-201ENST00000294008 PRKAB2O43741 272 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 GRK3P35626 688 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 ARFIP2P53365 341 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 APBA1Q02410 837 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 ZSWIM7Q19AV6 140 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 DGKKQ5KSL6 1271 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 B3GALNT2Q8NCR0 500 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 SHCBP1LQ9BZQ2 653 aa13.02□□□□□ -0.33
SLX4-201ENST00000294008 CNOT10Q9H9A5 744 aaKnown RBP13.02□□□□□ -0.33
SLX4-201ENST00000294008 NR1D1P20393 614 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 RGS4P49798 205 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 ACTR2P61160 394 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 MAPRE2Q15555 327 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 TYW3Q6IPR3 259 aaKnown RBP13.01□□□□□ -0.33
SLX4-201ENST00000294008 STX12Q86Y82 276 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 SLC9A7Q96T83 725 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 LRCH1Q9Y2L9 728 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 TRIM64A6NGJ6 449 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 USP17L5A8MUK1 530 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 FKBP3Q00688 224 aaKnown RBP13.01□□□□□ -0.33
SLX4-201ENST00000294008 GALNTL6Q49A17 601 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 ZNF560Q96MR9 790 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 MARCOQ9UEW3 520 aaPredicted RBP13.01□□□□□ -0.33
SLX4-201ENST00000294008 RIMS2Q9UQ26 1411 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 EVPLLA8MZ36 301 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 VAMP4O75379 141 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 ABCB1P08183 1280 aaPredicted RBP13.01□□□□□ -0.33
SLX4-201ENST00000294008 TXNP10599 105 aaKnown RBP13.01□□□□□ -0.33
SLX4-201ENST00000294008 MICU2Q8IYU8 434 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 UCMAQ8WVF2 138 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 MED8Q96G25 268 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 PHACTR1Q9C0D0 580 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 AAASQ9NRG9 546 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 CCDC85CA6NKD9 419 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 MBL2P11226 248 aaPredicted RBP13.01□□□□□ -0.33
SLX4-201ENST00000294008 DSG4Q86SJ6 1040 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 KIF2CQ99661 725 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 PRRG4Q9BZD6 226 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 SCN3BQ9NY72 215 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 A0A0D9SFI3 127 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 NDUFS2O75306 463 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 SFSWAPQ12872 951 aaKnown RBP13.01□□□□□ -0.33
SLX4-201ENST00000294008 KYNUQ16719 465 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 RNF149Q8NC42 400 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 SLC7A14Q8TBB6 771 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 WNK4Q96J92 1243 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 TRIM10Q9UDY6 481 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 SNX9Q9Y5X1 595 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 NME5P56597 212 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 KRT76Q01546 638 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 RHAGQ02094 409 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 RNF14Q9UBS8 474 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 NRBP1Q9UHY1 535 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 GGT7Q9UJ14 662 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 PCDHB9Q9Y5E1 797 aa13.01□□□□□ -0.33
SLX4-201ENST00000294008 HSMCR30P0CW71 290 aa13□□□□□ -0.33
SLX4-201ENST00000294008 ITGA4P13612 1032 aa13□□□□□ -0.33
SLX4-201ENST00000294008 EPHX4Q8IUS5 362 aa13□□□□□ -0.33
SLX4-201ENST00000294008 GFM2Q969S9 779 aaKnown RBP13□□□□□ -0.33
SLX4-201ENST00000294008 SOHLH2Q9NX45 425 aa13□□□□□ -0.33
SLX4-201ENST00000294008 POLRMTO00411 1230 aaKnown RBP13□□□□□ -0.33
SLX4-201ENST00000294008 XPO1O14980 1071 aaKnown RBP13□□□□□ -0.33
SLX4-201ENST00000294008 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
SLX4-201ENST00000294008 MTFR1Q15390 333 aa13□□□□□ -0.33
SLX4-201ENST00000294008 PADI6Q6TGC4 694 aa13□□□□□ -0.33
SLX4-201ENST00000294008 RTL3Q8N8U3 475 aaKnown RBP13□□□□□ -0.33
SLX4-201ENST00000294008 DHX36Q9H2U1 1008 aaKnown RBP13□□□□□ -0.33
SLX4-201ENST00000294008 TRIT1Q9H3H1 467 aaKnown RBP13□□□□□ -0.33
SLX4-201ENST00000294008 CHST12Q9NRB3 414 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms