RNA–Protein interactions for RNA: tF(GAA)M

tF(GAA)M, Transcript of Phenylalanine tRNA (tRNA-Phe), predicted by tRNAscan-SE analysis, yeastyeast

Gene tF(GAA)M, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tF(GAA)MtF(GAA)M TPK3P05986 398 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M RPC40P07703 335 aaKnown RBP0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M RPB3P16370 318 aaKnown RBP0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M PRP28P23394 588 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M IFM1P25038 676 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M OCA4P25366 362 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M IMP1P28627 190 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M IDH1P28834 360 aaKnown RBP RIP-Chip data0.31□□□□□ -2.36not detected
tF(GAA)MtF(GAA)M NPL6P32832 435 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M YKT6P36015 200 aaKnown RBP0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M VBA2P38358 474 aaKnown RBP0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M MDM31P38880 579 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M ARB1P40024 610 aaKnown RBP0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M YER076CP40049 302 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M NSA2P40078 261 aaKnown RBP0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M PUG1P40100 303 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M EMC5P40540 141 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M STB1P42845 420 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M MCM22P47167 239 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M UBP8P50102 471 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M YGR021WP53212 290 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M COG2P53271 262 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M NOP19P53317 196 aaPredicted RBP0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M FMP41P53889 259 aaKnown RBP0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M HHT1P61830 136 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M HSK3P69852 69 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M NUP49Q02199 472 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M YKR005CQ02203 525 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M DML1Q03652 475 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M CSN9Q03981 162 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M FCF1Q05498 189 aaPredicted RBP0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M NEJ1Q06148 342 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M DBP9Q06218 594 aaKnown RBP0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M YLR179CQ06252 201 aaKnown RBP0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M YDL114WQ07530 308 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M RRT7Q07829 113 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M DCI1Q08558 271 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M YPL162CQ12042 273 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M VIK1Q12045 647 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M ULA1Q12059 462 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M AEP3Q12089 606 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M YPR1Q12458 312 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M YOR011W-AQ3E807 68 aa0.31□□□□□ -2.36
tF(GAA)MtF(GAA)M YLR415CO13578 112 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M YLR156WP0CE96 114 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M YLR159WP0CE97 114 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M YLR161WP0CE98 114 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M MRP1P10662 321 aaKnown RBP0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M GPA2P10823 449 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M DPM1P14020 267 aaKnown RBP0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M SPO12P17123 173 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M STE18P18852 110 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M ZRC1P20107 442 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M CLB3P24870 427 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M TFC1P32367 649 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M YEL045CP32616 141 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M FZF1P32805 299 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M RPB7P34087 171 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M ELF1P36053 145 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M SRP102P36057 244 aaPredicted RBP0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M MRPL3P36516 390 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M BIG1P38813 335 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M CCT4P39078 528 aaKnown RBP0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M FCY21P40039 528 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M GLE2P40066 365 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M AVT6P40074 448 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M YER135CP40082 130 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M YMR134WP40207 237 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M SDP1P40479 209 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M MET28P40573 187 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M IGD1P43598 195 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M FAR3P46671 204 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M MRX5P47007 382 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M HNT2P49775 206 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M ALG9P53868 555 aaKnown RBP0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M OCA2P53949 197 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M SRL4Q03085 281 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M YDR210WQ03482 75 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M BET5Q03630 159 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M ASM4Q05166 528 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M YHC1Q05900 231 aaKnown RBP0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M FIT2Q08906 153 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M MPD1Q12404 318 aaKnown RBP0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M TFC7Q12415 435 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M EAF3Q12432 401 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M YMR030W-AQ3E760 96 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M YGR240C-AQ3E786 66 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M KSH1Q8TGJ3 72 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M RIB3Q99258 208 aa0.3□□□□□ -2.36
tF(GAA)MtF(GAA)M YLR462WO13556 202 aa0.29□□□□□ -2.36
tF(GAA)MtF(GAA)M RPL25P04456 142 aaKnown RBP0.29□□□□□ -2.36
tF(GAA)MtF(GAA)M RPL9AP05738 191 aaKnown RBP0.29□□□□□ -2.36
tF(GAA)MtF(GAA)M SNF4P12904 322 aa0.29□□□□□ -2.36
tF(GAA)MtF(GAA)M RFA1P22336 621 aaKnown RBP0.29□□□□□ -2.36
tF(GAA)MtF(GAA)M COQ3P27680 312 aa0.29□□□□□ -2.36
tF(GAA)MtF(GAA)M NTG1P31378 399 aa0.29□□□□□ -2.36
tF(GAA)MtF(GAA)M YET1P35723 206 aa0.29□□□□□ -2.36
tF(GAA)MtF(GAA)M SRY1P36007 326 aa0.29□□□□□ -2.36
tF(GAA)MtF(GAA)M RCN1P36054 211 aa0.29□□□□□ -2.36
tF(GAA)MtF(GAA)M YKL077WP36081 392 aa0.29□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms