RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C YLR179CQ06252 201 aaKnown RBP8.48□□□□□ -1.05
SSN3YPL042C ASR1Q06834 288 aa8.48□□□□□ -1.05
SSN3YPL042C FOL3Q12676 427 aaPredicted RBP8.48□□□□□ -1.05
SSN3YPL042C SEN1Q00416 2231 aaKnown RBP8.48□□□□□ -1.05
SSN3YPL042C TPI1P00942 248 aaKnown RBP8.47□□□□□ -1.05
SSN3YPL042C YSF3P0C074 85 aaPredicted RBP8.47□□□□□ -1.05
SSN3YPL042C YCR100CP25606 316 aa8.47□□□□□ -1.05
SSN3YPL042C ECM15P35195 104 aa8.47□□□□□ -1.05
SSN3YPL042C YPT53P36019 220 aa8.47□□□□□ -1.05
SSN3YPL042C YJL193WP39542 402 aa8.47□□□□□ -1.05
SSN3YPL042C IKS1P47042 667 aa8.47□□□□□ -1.05
SSN3YPL042C ATG21Q02887 496 aa8.47□□□□□ -1.05
SSN3YPL042C TY1A-MR1Q04215 440 aa8.47□□□□□ -1.05
SSN3YPL042C SYC1Q08553 188 aaPredicted RBP8.47□□□□□ -1.05
SSN3YPL042C HNT3Q08702 217 aa8.47□□□□□ -1.05
SSN3YPL042C YHR213W-AQ8TGT4 77 aa8.47□□□□□ -1.05
SSN3YPL042C CYC3P06182 269 aa8.46□□□□□ -1.05
SSN3YPL042C YOL162WP0CF19 215 aa8.46□□□□□ -1.05
SSN3YPL042C MLF3P32047 452 aa8.46□□□□□ -1.05
SSN3YPL042C IES6P32617 166 aa8.46□□□□□ -1.05
SSN3YPL042C ARN2P38724 620 aa8.46□□□□□ -1.05
SSN3YPL042C IPI1P38803 334 aaPredicted RBP8.46□□□□□ -1.05
SSN3YPL042C CTK2P46962 323 aa8.46□□□□□ -1.05
SSN3YPL042C MGA1P53050 456 aa8.46□□□□□ -1.05
SSN3YPL042C MPA43P53583 542 aaPredicted RBP8.46□□□□□ -1.05
SSN3YPL042C SEC13Q04491 297 aaKnown RBP8.46□□□□□ -1.05
SSN3YPL042C ELP6Q04868 273 aa8.46□□□□□ -1.05
SSN3YPL042C NOC4Q06512 552 aaPredicted RBP8.46□□□□□ -1.05
SSN3YPL042C DET1Q99288 334 aaKnown RBP8.46□□□□□ -1.05
SSN3YPL042C RNP1P32385 249 aa8.46□□□□□ -1.06
SSN3YPL042C MRPL49P40858 161 aaPredicted RBP8.46□□□□□ -1.06
SSN3YPL042C ERV14P53173 138 aa8.46□□□□□ -1.06
SSN3YPL042C APS2Q00381 147 aa8.46□□□□□ -1.06
SSN3YPL042C NCE101Q02820 53 aa8.46□□□□□ -1.06
SSN3YPL042C SPC3Q12133 184 aa8.46□□□□□ -1.06
SSN3YPL042C Q0142Q9ZZW4 58 aa8.46□□□□□ -1.06
SSN3YPL042C CDC50P25656 391 aa8.45□□□□□ -1.06
SSN3YPL042C MTC4P38335 694 aaKnown RBP8.45□□□□□ -1.06
SSN3YPL042C YER076CP40049 302 aa8.45□□□□□ -1.06
SSN3YPL042C GEP5Q12393 293 aa8.45□□□□□ -1.06
SSN3YPL042C MRPL44P19956 98 aa8.44□□□□□ -1.06
SSN3YPL042C INO2P26798 304 aa8.44□□□□□ -1.06
SSN3YPL042C VMA5P31412 392 aaKnown RBP8.44□□□□□ -1.06
SSN3YPL042C APL3P38065 1025 aa8.44□□□□□ -1.06
SSN3YPL042C MDM31P38880 579 aa8.44□□□□□ -1.06
SSN3YPL042C PKR1Q03880 122 aaKnown RBP8.44□□□□□ -1.06
SSN3YPL042C DLT1Q04216 342 aa8.44□□□□□ -1.06
SSN3YPL042C GAS2Q06135 555 aa8.44□□□□□ -1.06
SSN3YPL042C TY1A-BRQ12217 440 aa8.44□□□□□ -1.06
SSN3YPL042C YIL046W-AQ3E7Z4 54 aa8.44□□□□□ -1.06
SSN3YPL042C BRR2P32639 2163 aaKnown RBP8.44□□□□□ -1.06
SSN3YPL042C YKL077WP36081 392 aa8.43□□□□□ -1.06
SSN3YPL042C HNT2P49775 206 aa8.43□□□□□ -1.06
SSN3YPL042C PMT5P52867 743 aa8.43□□□□□ -1.06
SSN3YPL042C YMR087WQ04299 284 aa8.43□□□□□ -1.06
SSN3YPL042C YMR315WQ04869 349 aaKnown RBP8.43□□□□□ -1.06
SSN3YPL042C RLM1Q12224 676 aa8.43□□□□□ -1.06
SSN3YPL042C YDL007C-AQ2V2Q0 85 aa8.43□□□□□ -1.06
SSN3YPL042C COX1P00401 534 aa8.43□□□□□ -1.06
SSN3YPL042C SPS2P08459 502 aa8.43□□□□□ -1.06
SSN3YPL042C RPS20P38701 121 aaKnown RBP8.43□□□□□ -1.06
SSN3YPL042C SMB1P40018 196 aaKnown RBP8.43□□□□□ -1.06
SSN3YPL042C GNA1P43577 159 aaPredicted RBP8.43□□□□□ -1.06
SSN3YPL042C YGL101WP53144 215 aa8.43□□□□□ -1.06
SSN3YPL042C COX18P53239 316 aa8.43□□□□□ -1.06
SSN3YPL042C HCH1P53834 153 aa8.43□□□□□ -1.06
SSN3YPL042C NRG1Q03125 231 aa8.43□□□□□ -1.06
SSN3YPL042C GPI17Q04080 534 aa8.43□□□□□ -1.06
SSN3YPL042C GAL83Q04739 417 aa8.43□□□□□ -1.06
SSN3YPL042C IZH3Q07959 543 aa8.43□□□□□ -1.06
SSN3YPL042C YOL073CQ08232 322 aa8.43□□□□□ -1.06
SSN3YPL042C MED7Q08278 222 aa8.43□□□□□ -1.06
SSN3YPL042C FEX1Q08913 375 aa8.43□□□□□ -1.06
SSN3YPL042C FCF2Q12035 217 aaPredicted RBP8.43□□□□□ -1.06
SSN3YPL042C ATX2Q12067 313 aa8.43□□□□□ -1.06
SSN3YPL042C YLR050CQ12155 161 aaKnown RBP8.43□□□□□ -1.06
SSN3YPL042C NPC2Q12408 173 aa8.43□□□□□ -1.06
SSN3YPL042C ERD1P16151 362 aa8.42□□□□□ -1.06
SSN3YPL042C SCO1P23833 295 aa8.42□□□□□ -1.06
SSN3YPL042C YHR035WP38769 630 aa8.42□□□□□ -1.06
SSN3YPL042C RRP4P38792 359 aaKnown RBP8.42□□□□□ -1.06
SSN3YPL042C PHO90P39535 881 aa8.42□□□□□ -1.06
SSN3YPL042C SNO3P43544 222 aa8.42□□□□□ -1.06
SSN3YPL042C SSY5P47002 699 aa8.42□□□□□ -1.06
SSN3YPL042C COS10P52924 374 aa8.42□□□□□ -1.06
SSN3YPL042C TMA23Q03525 211 aa8.42□□□□□ -1.06
SSN3YPL042C TRS23Q03784 219 aa8.42□□□□□ -1.06
SSN3YPL042C ERG27Q12452 347 aaKnown RBP8.42□□□□□ -1.06
SSN3YPL042C SAL1D6W196 494 aa8.41□□□□□ -1.06
SSN3YPL042C DAT1P13483 248 aaKnown RBP8.41□□□□□ -1.06
SSN3YPL042C SNC1P31109 117 aa8.41□□□□□ -1.06
SSN3YPL042C TIM12P32830 109 aa8.41□□□□□ -1.06
SSN3YPL042C NSG1P38837 291 aa8.41□□□□□ -1.06
SSN3YPL042C RPA43P46669 326 aa8.41□□□□□ -1.06
SSN3YPL042C ARO8P53090 500 aaKnown RBP8.41□□□□□ -1.06
SSN3YPL042C MMS2P53152 137 aa8.41□□□□□ -1.06
SSN3YPL042C SNT309Q06091 175 aaPredicted RBP8.41□□□□□ -1.06
SSN3YPL042C YOR283WQ12040 230 aaKnown RBP8.41□□□□□ -1.06
SSN3YPL042C YGR026WP53217 278 aa8.4□□□□□ -1.06
SSN3YPL042C POP6P53218 158 aa8.4□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms