RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W YMR279CQ03263 540 aa2.27□□□□□ -2.05
SRL1YOR247W GRH1Q04410 372 aaKnown RBP2.27□□□□□ -2.05
SRL1YOR247W TUS1Q06412 1307 aa2.26□□□□□ -2.05
SRL1YOR247W YPR096CO13587 100 aa2.26□□□□□ -2.05
SRL1YOR247W MET2P08465 486 aa2.26□□□□□ -2.05
SRL1YOR247W FCY2P17064 533 aa2.26□□□□□ -2.05
SRL1YOR247W AGA2P32781 87 aa2.26□□□□□ -2.05
SRL1YOR247W APS1P35181 156 aa2.26□□□□□ -2.05
SRL1YOR247W DOG2P38773 246 aa2.26□□□□□ -2.05
SRL1YOR247W DOG1P38774 246 aa2.26□□□□□ -2.05
SRL1YOR247W RPF1P38805 295 aaKnown RBP2.26□□□□□ -2.05
SRL1YOR247W YAR068WP39564 161 aa2.26□□□□□ -2.05
SRL1YOR247W ARC15P40518 154 aaRIP-Chip data2.26□□□□□ -2.05 RIP-Chip
SRL1YOR247W YJL016WP47072 561 aa2.26□□□□□ -2.05
SRL1YOR247W YGL088WP53151 121 aa2.26□□□□□ -2.05
SRL1YOR247W SNZ1Q03148 297 aa2.26□□□□□ -2.05
SRL1YOR247W AGC1Q12482 902 aa2.26□□□□□ -2.05
SRL1YOR247W SAS5Q99314 248 aa2.26□□□□□ -2.05
SRL1YOR247W YPL229WQ99395 206 aa2.26□□□□□ -2.05
SRL1YOR247W QCR7P00128 127 aa2.25□□□□□ -2.05
SRL1YOR247W OAC1P32332 324 aa2.25□□□□□ -2.05
SRL1YOR247W ASF2P32448 525 aaPredicted RBP2.25□□□□□ -2.05
SRL1YOR247W YKR032WP36127 104 aa2.25□□□□□ -2.05
SRL1YOR247W YBR063CP38083 404 aa2.25□□□□□ -2.05
SRL1YOR247W TIF34P40217 347 aaKnown RBP2.25□□□□□ -2.05
SRL1YOR247W RSM25P40496 264 aa2.25□□□□□ -2.05
SRL1YOR247W YIL001WP40560 513 aa2.25□□□□□ -2.05
SRL1YOR247W YJR056CP47115 236 aa2.25□□□□□ -2.05
SRL1YOR247W YGR026WP53217 278 aa2.25□□□□□ -2.05
SRL1YOR247W SYF2P53277 215 aaPredicted RBP2.25□□□□□ -2.05
SRL1YOR247W NOP19P53317 196 aaPredicted RBP2.25□□□□□ -2.05
SRL1YOR247W PEX12Q04370 399 aa2.25□□□□□ -2.05
SRL1YOR247W FEX1Q08913 375 aa2.25□□□□□ -2.05
SRL1YOR247W NIP7Q08962 181 aaKnown RBP2.25□□□□□ -2.05
SRL1YOR247W FEX2Q08991 375 aa2.25□□□□□ -2.05
SRL1YOR247W MDM32Q12171 622 aa2.25□□□□□ -2.05
SRL1YOR247W PRM7Q12459 698 aa2.25□□□□□ -2.05
SRL1YOR247W CCA1P21269 546 aa2.24□□□□□ -2.05
SRL1YOR247W ATP7P30902 174 aa2.24□□□□□ -2.05
SRL1YOR247W GRE3P38715 327 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
SRL1YOR247W YHR125WP38831 101 aa2.24□□□□□ -2.05
SRL1YOR247W YER188WP40103 239 aa2.24□□□□□ -2.05
SRL1YOR247W ATG39Q06159 398 aa2.24□□□□□ -2.05
SRL1YOR247W YOR268CQ08734 132 aa2.24□□□□□ -2.05
SRL1YOR247W YCL012CQ8J0M4 134 aa2.24□□□□□ -2.05
SRL1YOR247W Q0255P03881 472 aa2.23□□□□□ -2.05
SRL1YOR247W SPS18P32572 300 aa2.23□□□□□ -2.05
SRL1YOR247W VMA11P32842 164 aa2.23□□□□□ -2.05
SRL1YOR247W MRPL28P36527 147 aa2.23□□□□□ -2.05
SRL1YOR247W RMD6P39975 231 aa2.23□□□□□ -2.05
SRL1YOR247W COG3P40094 801 aa2.23□□□□□ -2.05
SRL1YOR247W RPA43P46669 326 aa2.23□□□□□ -2.05
SRL1YOR247W MMS2P53152 137 aa2.23□□□□□ -2.05
SRL1YOR247W RSM10Q03201 203 aa2.23□□□□□ -2.05
SRL1YOR247W GPM2Q12008 311 aa2.23□□□□□ -2.05
SRL1YOR247W RPL25P04456 142 aaKnown RBP2.22□□□□□ -2.05
SRL1YOR247W DPM1P14020 267 aaKnown RBP2.22□□□□□ -2.05
SRL1YOR247W KRE1P17260 313 aa2.22□□□□□ -2.05
SRL1YOR247W ATG22P25568 528 aa2.22□□□□□ -2.05
SRL1YOR247W MIG1P27705 504 aa2.22□□□□□ -2.05
SRL1YOR247W SKG1P36169 355 aa2.22□□□□□ -2.05
SRL1YOR247W SEC72P39742 193 aaKnown RBP2.22□□□□□ -2.05
SRL1YOR247W PIR5P46999 287 aa2.22□□□□□ -2.05
SRL1YOR247W LPP1Q04396 274 aa2.22□□□□□ -2.05
SRL1YOR247W CDD1Q06549 142 aa2.22□□□□□ -2.05
SRL1YOR247W YHR139C-AO13536 103 aa2.21□□□□□ -2.06
SRL1YOR247W YPR170W-BP0C5R9 85 aa2.21□□□□□ -2.06
SRL1YOR247W APA2P22108 325 aa2.21□□□□□ -2.06
SRL1YOR247W ADE1P27616 306 aa2.21□□□□□ -2.06
SRL1YOR247W CAF4P36130 643 aa2.21□□□□□ -2.06
SRL1YOR247W ECM33P38248 429 aaKnown RBP2.21□□□□□ -2.06
SRL1YOR247W YHL026CP38740 315 aa2.21□□□□□ -2.06
SRL1YOR247W SPO73P40031 143 aa2.21□□□□□ -2.06
SRL1YOR247W YER084WP40057 128 aa2.21□□□□□ -2.06
SRL1YOR247W YJL144WP47009 104 aa2.21□□□□□ -2.06
SRL1YOR247W LSM7P53905 115 aaKnown RBP2.21□□□□□ -2.06
SRL1YOR247W YNL010WP53981 241 aaKnown RBP2.21□□□□□ -2.06
SRL1YOR247W YET3Q07451 203 aa2.21□□□□□ -2.06
SRL1YOR247W TDA8Q6B2U8 126 aa2.21□□□□□ -2.06
SRL1YOR247W RPL9AP05738 191 aaKnown RBP2.2□□□□□ -2.06
SRL1YOR247W SEC4P07560 215 aaKnown RBP2.2□□□□□ -2.06
SRL1YOR247W SCM4P32564 187 aa2.2□□□□□ -2.06
SRL1YOR247W SHG1P38337 142 aa2.2□□□□□ -2.06
SRL1YOR247W EGD2P38879 174 aaKnown RBP2.2□□□□□ -2.06
SRL1YOR247W AST2P39945 430 aaKnown RBP2.2□□□□□ -2.06
SRL1YOR247W IRC22P40006 225 aa2.2□□□□□ -2.06
SRL1YOR247W RPL9BP51401 191 aaKnown RBP2.2□□□□□ -2.06
SRL1YOR247W DIA1P54005 336 aa2.2□□□□□ -2.06
SRL1YOR247W AKR2Q12013 749 aa2.2□□□□□ -2.06
SRL1YOR247W RPL26AP05743 127 aaKnown RBP2.19□□□□□ -2.06
SRL1YOR247W CDC7P06243 507 aa2.19□□□□□ -2.06
SRL1YOR247W PUT1P09368 476 aa2.19□□□□□ -2.06
SRL1YOR247W KSS1P14681 368 aa2.19□□□□□ -2.06
SRL1YOR247W MAG1P22134 296 aaKnown RBP2.19□□□□□ -2.06
SRL1YOR247W TCA17P32613 152 aa2.19□□□□□ -2.06
SRL1YOR247W PTM1P32857 523 aa2.19□□□□□ -2.06
SRL1YOR247W POP4P38336 279 aa2.19□□□□□ -2.06
SRL1YOR247W RPL26BP53221 127 aaKnown RBP2.19□□□□□ -2.06
SRL1YOR247W SSU72P53538 206 aaPredicted RBP2.19□□□□□ -2.06
SRL1YOR247W RTC4P53850 401 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms