RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W BIO3P50277 480 aa2.12□□□□□ -2.07
UBP15YMR304W YLR460CP54007 376 aa2.12□□□□□ -2.07
UBP15YMR304W ARA2Q04212 335 aa2.12□□□□□ -2.07
UBP15YMR304W SPO75Q07798 868 aa2.12□□□□□ -2.07
UBP15YMR304W MMT2Q08970 484 aa2.12□□□□□ -2.07
UBP15YMR304W ERG27Q12452 347 aaKnown RBP2.12□□□□□ -2.07
UBP15YMR304W BOL1Q3E793 110 aa2.12□□□□□ -2.07
UBP15YMR304W STE18P18852 110 aa2.12□□□□□ -2.07
UBP15YMR304W SFK1P35735 353 aa2.12□□□□□ -2.07
UBP15YMR304W AZF1P41696 914 aa2.12□□□□□ -2.07
UBP15YMR304W SFH5P47008 294 aa2.12□□□□□ -2.07
UBP15YMR304W GPI15P53961 229 aa2.12□□□□□ -2.07
UBP15YMR304W MSS11Q03825 758 aa2.12□□□□□ -2.07
UBP15YMR304W IWR1Q07532 353 aaPredicted RBP2.12□□□□□ -2.07
UBP15YMR304W CRD1Q07560 283 aa2.12□□□□□ -2.07
UBP15YMR304W YGK3Q12222 375 aaPredicted RBP2.12□□□□□ -2.07
UBP15YMR304W COX17Q12287 69 aa2.12□□□□□ -2.07
UBP15YMR304W RPL6BP05739 176 aaKnown RBP2.11□□□□□ -2.07
UBP15YMR304W CPA1P07258 411 aaKnown RBP2.11□□□□□ -2.07
UBP15YMR304W TRP4P07285 380 aaPredicted RBP2.11□□□□□ -2.07
UBP15YMR304W SAM35P14693 329 aa2.11□□□□□ -2.07
UBP15YMR304W YCR061WP25639 631 aa2.11□□□□□ -2.07
UBP15YMR304W ERG9P29704 444 aa2.11□□□□□ -2.07
UBP15YMR304W SNC1P31109 117 aa2.11□□□□□ -2.07
UBP15YMR304W PRS4P38063 326 aaPredicted RBP2.11□□□□□ -2.07
UBP15YMR304W ROT2P38138 954 aa2.11□□□□□ -2.07
UBP15YMR304W BNA4P38169 460 aa2.11□□□□□ -2.07
UBP15YMR304W ATG8P38182 117 aaRIP-Chip data2.11□□□□□ -2.07not detected
UBP15YMR304W TSL1P38427 1098 aaKnown RBP2.11□□□□□ -2.07
UBP15YMR304W SRP68P38687 599 aaKnown RBP2.11□□□□□ -2.07
UBP15YMR304W EFM1P38732 585 aa2.11□□□□□ -2.07
UBP15YMR304W CKB2P38930 258 aa2.11□□□□□ -2.07
UBP15YMR304W RPS12P48589 143 aaKnown RBP2.11□□□□□ -2.07
UBP15YMR304W FRE4P53746 719 aa2.11□□□□□ -2.07
UBP15YMR304W GOT1Q03554 138 aa2.11□□□□□ -2.07
UBP15YMR304W PRM6Q04705 352 aa2.11□□□□□ -2.07
UBP15YMR304W LOA1Q06508 300 aa2.11□□□□□ -2.07
UBP15YMR304W PEP4P07267 405 aaKnown RBP2.11□□□□□ -2.07
UBP15YMR304W ARO2P28777 376 aaKnown RBP2.11□□□□□ -2.07
UBP15YMR304W YMC1P32331 307 aa2.11□□□□□ -2.07
UBP15YMR304W RAD23P32628 398 aaKnown RBP2.11□□□□□ -2.07
UBP15YMR304W UGP1P32861 499 aaKnown RBP2.11□□□□□ -2.07
UBP15YMR304W YNK1P36010 153 aaKnown RBP2.11□□□□□ -2.07
UBP15YMR304W MRPL24P36525 258 aaPredicted RBP2.11□□□□□ -2.07
UBP15YMR304W YMC2P38087 329 aa2.11□□□□□ -2.07
UBP15YMR304W LAG1P38703 411 aa2.11□□□□□ -2.07
UBP15YMR304W YER085CP40058 173 aa2.11□□□□□ -2.07
UBP15YMR304W ECO1P43605 281 aa2.11□□□□□ -2.07
UBP15YMR304W GLG2P47011 380 aa2.11□□□□□ -2.07
UBP15YMR304W YDL186WP48568 277 aa2.11□□□□□ -2.07
UBP15YMR304W YGL230CP53074 147 aa2.11□□□□□ -2.07
UBP15YMR304W YGR053CP53234 283 aa2.11□□□□□ -2.07
UBP15YMR304W SNO2P53823 222 aa2.11□□□□□ -2.07
UBP15YMR304W CUS2P53830 285 aaPredicted RBP2.11□□□□□ -2.07
UBP15YMR304W FMP41P53889 259 aaKnown RBP2.11□□□□□ -2.07
UBP15YMR304W CTF19Q02732 369 aa2.11□□□□□ -2.07
UBP15YMR304W RRP45Q05636 305 aaKnown RBP2.11□□□□□ -2.07
UBP15YMR304W YPR078CQ06813 372 aa2.11□□□□□ -2.07
UBP15YMR304W VAM3Q12241 283 aa2.11□□□□□ -2.07
UBP15YMR304W COX19Q3E731 98 aa2.11□□□□□ -2.07
UBP15YMR304W MRP17P28778 131 aa2.11□□□□□ -2.07
UBP15YMR304W ASC1P38011 319 aaKnown RBP2.11□□□□□ -2.07
UBP15YMR304W YJR011CP47086 261 aaPredicted RBP2.11□□□□□ -2.07
UBP15YMR304W NAN1Q02931 896 aaKnown RBP2.11□□□□□ -2.07
UBP15YMR304W YPR114WQ06107 315 aa2.11□□□□□ -2.07
UBP15YMR304W THI20Q08224 551 aa2.11□□□□□ -2.07
UBP15YMR304W NBP2Q12163 236 aa2.11□□□□□ -2.07
UBP15YMR304W POC4Q12245 148 aaPredicted RBP2.11□□□□□ -2.07
UBP15YMR304W YLR126CQ12288 251 aa2.11□□□□□ -2.07
UBP15YMR304W YPR014CQ6B0W2 109 aa2.11□□□□□ -2.07
UBP15YMR304W Q0010Q9ZZX9 128 aa2.11□□□□□ -2.07
UBP15YMR304W SNF5P18480 905 aa2.1□□□□□ -2.07
UBP15YMR304W MAK31P23059 88 aa2.1□□□□□ -2.07
UBP15YMR304W SRB6P32570 121 aa2.1□□□□□ -2.07
UBP15YMR304W YHL041WP38730 149 aa2.1□□□□□ -2.07
UBP15YMR304W YNL198CP40166 100 aa2.1□□□□□ -2.07
UBP15YMR304W CDC40P40968 455 aaPredicted RBP2.1□□□□□ -2.07
UBP15YMR304W SCD6P45978 349 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
UBP15YMR304W BNS1P50084 137 aa2.1□□□□□ -2.07
UBP15YMR304W COG7P53195 279 aa2.1□□□□□ -2.07
UBP15YMR304W SCW4P53334 386 aaKnown RBP2.1□□□□□ -2.07
UBP15YMR304W LSM7P53905 115 aaKnown RBP2.1□□□□□ -2.07
UBP15YMR304W COX12Q01519 83 aa2.1□□□□□ -2.07
UBP15YMR304W MIX17Q03667 156 aa2.1□□□□□ -2.07
UBP15YMR304W SEN15Q04675 128 aa2.1□□□□□ -2.07
UBP15YMR304W YLR296WQ05898 108 aa2.1□□□□□ -2.07
UBP15YMR304W RMD5Q12508 421 aa2.1□□□□□ -2.07
UBP15YMR304W YKL023C-AQ2V2P3 75 aa2.1□□□□□ -2.07
UBP15YMR304W YDR157WA0A023PZE8 133 aa2.1□□□□□ -2.07
UBP15YMR304W QCR7P00128 127 aa2.1□□□□□ -2.07
UBP15YMR304W HHF1P02309 103 aaKnown RBP2.1□□□□□ -2.07
UBP15YMR304W RPB3P16370 318 aaKnown RBP2.1□□□□□ -2.07
UBP15YMR304W ACO1P19414 778 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
UBP15YMR304W DGR2P32330 852 aa2.1□□□□□ -2.07
UBP15YMR304W PDC2P32896 925 aa2.1□□□□□ -2.07
UBP15YMR304W YKL070WP36087 169 aa2.1□□□□□ -2.07
UBP15YMR304W SVP26P38869 228 aa2.1□□□□□ -2.07
UBP15YMR304W YHR210CP38893 341 aa2.1□□□□□ -2.07
UBP15YMR304W SNU13P39990 126 aaKnown RBP2.1□□□□□ -2.07
UBP15YMR304W SPC25P40014 221 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms